Ficedula albicollis (collared flycatcher): 101818714
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Entry
101818714 CDS
T02815
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fab03009
]
101818714
03036 Chromosome and associated proteins [BR:
fab03036
]
101818714
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101818714
Ribosome biogenesis [BR:
fab03009
]
Eukaryotic type
Pre-60S particles
Helicases
101818714
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101818714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
DNMK
Motif
Other DBs
NCBI-GeneID:
101818714
NCBI-ProteinID:
XP_005048018
LinkDB
All DBs
Position
6:1352714..1365091
Genome browser
AA seq
772 aa
AA seq
DB search
MAAAPLTARGARRDLQSSRCAPEHAGSCSPRPTAAGHWLLAGAAPPPRCRIRRPLAAGRL
GRSERDARRARGWFCALFSVPCRLDPRACVFICSVPCQKEKKEKKSKRRDKFQRGKTQTD
ESEESDEERYAPKPKKSKSVSKQNGHTKEESLEKSRVSFSSKSSSRRSRHSSSSETSSES
ESESEPDQELTGEQKEGAFSNFSISKETVQLLQARGVTYLFPVQVKTFNPVYSGKDVIAQ
ARTGTGKTFSFAIPLIEKLQGDSQERRRGRPPKVLVLCPTRELANQVAKDFKDITRKLTV
GCFYGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGF
AEQVEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQIDLIGKRTQKAAT
TVEHLAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASMKQDCQSLHG
DIPQKQREITLKGFRNGTFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTG
RAGRTGICICFYQRKEEYQLRHVEQKAGITFKRVGVPTATDIIKASSKDAMRCLDSVPQT
AIEYFRESAQLLIKEKGPVNALAAALAHISGATSIEQRSLLNSDAGFVTMILHCSEEISS
MSHAVRRLREVLGDDIERKVNRMCFLKGKMGVCFDVPVADQKEIEARWEDSKHWRLCVAT
ELPELVESIRGGSGGGNGRSFSSSRNGRRGGSGRNRFRSRGQKRSFSRAFEH
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcccccctcacggcgcgcggggctcgccgggacttgcagtcctcacgctgt
gccccggagcacgccgggagttgtagtcccaggccgacggccgcaggccattggctgttg
gccggcgcggccccgcccccgcgctgccgcatccgccgtccattggccgccgggcgcctc
ggccgctcggagcgtgacgcgaggcgggcgcgcggctggttctgcgccctcttctctgtt
ccgtgtcgcttggatccacgagcgtgtgttttcatttgctctgtgccttgccagaaggag
aaaaaggagaagaaatctaaacgccgggacaagtttcagaggggcaagactcagacagat
gaaagcgaggaatcggatgaggagcgctatgccccgaaacccaagaaatcaaagagtgtc
agtaaacagaacggtcacacgaaggaggaaagcctggagaaatcgagagtgtcctttagc
agcaaatcctcctcccgcagaagccgacacagtagttctagtgaaacgtccagtgagagc
gagagtgagagcgagccggatcaggagttgactggagaacagaaagagggtgctttctcc
aatttttctatttccaaagaaactgtccagcttcttcaagctcgaggagtgacgtacctg
ttccccgtgcaagtgaagaccttcaacccagtgtactctggcaaagatgtcattgctcaa
gcacgaactggaacagggaaaacattctcttttgctattcccttaattgaaaagcttcag
ggagattcacaggaaagaaggagaggccgtccaccaaaggttctagtgctttgtccaaca
agagagctggcaaatcaggttgccaaagatttcaaggacatcacaaggaagctgacagta
ggttgtttctatggaggaactccctataatggacaaattgatctcatgagaagtggcatt
gacattttggttggcacacctggtcgaatcaaagaccacctgcagaatggcaagctggac
cttaccaaggtgaaacacgtggtgcttgatgaagttgaccagatgctggacatgggattt
gctgagcaagtggaagacattttacgagttgcatacaagaaggattctgaagacaatccc
cagacactgctgttttctgcaacttgcccacactgggtgtatgatgtggctaagaaatac
atgaagtctagatatgaacagattgacctgattgggaaaagaactcagaaggctgctaca
acagtggaacatttggcaatagagtgtcactggtctcagagagctgcagttattggagat
gtcattcaggtctacagtggcagccacgggaggaccattgtcttctgtgagaccaaaaag
gaggcaaatgagctggctctgaatgcttcaatgaaacaggattgccagtcattgcatggt
gacattcctcagaagcaaagagagatcacactgaagggttttagaaatggtacatttaaa
gttctggttgcaaccaacgtagctgcccgtggtttagatatcccagaagttgacctggtt
gtacagagctcaccaccaaaggatgtggagtcctacatccaccgttctgggcgcacgggt
cgagctgggcgcactgggatctgtatctgtttctatcagcggaaggaggagtatcagtta
agacacgtggaacaaaaagcgggcattacattcaagcgtgttggtgttcctactgcaaca
gacattataaaggcttccagcaaagatgccatgaggtgcctggattctgttcctcagact
gctattgagtatttcagagaatctgctcagttgctaataaaagagaagggaccagttaat
gctctggctgcagctctggcccatatttcgggtgctacttccattgaacagcgctcactg
ctgaactctgatgcgggatttgttacaatgatacttcactgctctgaagaaataagcagc
atgagccatgctgtgcgaagactgcgagaggtgttgggtgatgatattgaacggaaggtg
aacagaatgtgcttcctcaagggtaaaatgggtgtgtgctttgatgttcctgtggcagac
caaaaagaaatagaggcaaggtgggaggattcgaaacactggcgtttgtgtgtggccact
gaattgccagagctggtggaatccatacgaggagggagtggtggaggaaatggccggagt
ttctcaagctccaggaacggtcggcgtggtggctctgggagaaacagattcaggagcaga
ggccagaaacgaagtttcagcagagcatttgaacattaa
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