Ficedula albicollis (collared flycatcher): 101818912
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Entry
101818912 CDS
T02815
Symbol
ATRNL1
Name
(RefSeq) attractin like 1
KO
K24332
attractin
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
fab04091
]
101818912 (ATRNL1)
Lectins [BR:
fab04091
]
C-Type lectins
Others
101818912 (ATRNL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
GBD_ATRN
Kelch_1
EGF_LMN_ATRN
Kelch_HCF
Kelch_2
CUB
EGF_TEN
Kelch_FKB95
Beta-prop_TYW4
PSI
NANM
EGF_Teneurin
EGF_laminin
EGF_2
PSI_integrin
TMEM100
Motif
Other DBs
NCBI-GeneID:
101818912
NCBI-ProteinID:
XP_005048793
UniProt:
U3JHR6
LinkDB
All DBs
Position
6:29243777..29691680
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AA seq
1377 aa
AA seq
DB search
MDLGSGGRRAGAAPAGPAAWRPFPSACCCCFASLLDVNSWLLFYGFLYLALYAQVSQSKS
CDKISCFSGHCVNSTCVCDQGWVGDQCQHCQGRFKLTEPSGYLTDGPINYKYKTKCTWLI
EGYPNAILRLRFNHFATECSWDHMYVYDGDSIYAPLIAVFSGLIVPEVRGNETVPEVVTT
SGYALLHFFSDAAYNLTGFNIFYSINSCPNNCSEHGKCTTSLSVPSRVYCECDKYWKGEA
CDIPYCKANCGSPDHGYCDLTGEKLCVCNDSWQGPDCSLNVPSTESYWILPNVKPFSPSV
GRASHKAVLHGKFMWVIGGYTFNYSSFQMVLNYNLESSIWNVVPVSKGPLQRYGHTLALY
QEDIYMYGGKIETSYGNVTDELWVFNIPSQTWSTRIPAVLVHGQQYAVEGHSAHIVELDS
RDVVMIVIFGYSSIYGYTSIVQEYYIRSNSWLVPETKGAIVQGGYGHTSVYDELTKSIYV
HGGYKALPGNKYGLVDDLYRYEVNTRTWTILKESGFARYLHSAVLINGAMLIFGGNTHND
TSLSNGAKCFSADFLAYDIACDEWKILPKPNLHRDVNRFGHTAVVSNGSMYIFGGFSSVL
LNDILVYKPPNCEAFRDEELCKNARPGIRCLWNRKHCESWESGHANNILRAKCPKKTAAA
DDRCYRYADCASCTANTNGCQWCDDKKCISANSNCSMSVKNYTKCHVRNEQICNKLTSCK
SCSLHLNCQWDQRQQECQALPAHLCGERWNHIGDACLHINSSRESYDNAKLYCYNLSGNL
ASLTTSKEVEFVLDEIQKYTLQKISPWVGLRKINISYWGWDDMSPFTNTTLQWLPGEPND
SGFCAYLERAEVAGLKANPCTAMADGLVCEKPVVSPNQNARPCKKPCSLRTTCSNCTSNG
MECMWCSSTKRCVDSNAYIISFPYGQCLEWQTATCSPQNCSGLRTCGQCLEQPGCGWCND
PSNTGKGQCLEGSSRGPMKPVSVHSNEMVLDATLCPREKNYEWSFIQCPACQCNGHSTCV
NSNVCDQCKNLTTGKQCETCMPGYYGDPTNGGQCTACTCSGHANNCHMQTGKCFCTTKGI
KGDQCQLCDSENRYLGNPLRGTCYYSLLIDYQFTFSLLQEDDRHHTAINFIANPEQSNKN
LDISINASNNFNLNITWSIGSTAGTISGEEIPVVSKVNIKEYRDSFSCEKFNFRSNPNIT
FYVYVSNFSWPIKIQIAFSQHNTIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQTCWASRR
REQLMRERQQMASRPFASVDVALEVGAEQTDFLRGPLEGAPKPIAIEPCSGNRAAVLTVF
LCLPRGPSGVPPPGQSGLAIASALIDISQQKPADCKDKSSGVRNRKHHLSTRQGTCV
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggcagcggcggccggagagcgggggctgcccccgcgggcccggccgcatgg
agacctttcccctccgcctgctgctgctgcttcgcctcgctcctggatgtgaacagctgg
ctgctcttctacggcttcctctacctggccctctatgcccaggtgtcccagtccaagtcc
tgcgacaaaatctcctgcttctcgggtcattgtgtcaactccacctgcgtctgcgaccag
ggctgggtgggagaccagtgccaacactgccagggcaggttcaagttaacagaaccttct
ggatatttaacagatggacctataaattataaatacaaaactaaatgcacatggttaatt
gaaggatacccaaatgcgatactaagattaaggtttaatcactttgccacagaatgtagc
tgggaccatatgtatgtatatgatggagattcaatatatgcacctttaatagctgtattt
agtggtctaatagtccctgaagtgcgtggaaatgaaactgttccagaagtggttactaca
tctggctatgcattgctgcacttttttagtgatgctgcttataacctaacaggatttaat
atcttttattcaattaactcttgccctaataactgctcagaacatggcaagtgcacaacc
agcctgtctgtcccgagccgggtgtactgtgagtgtgacaagtactggaaaggagaggcc
tgtgacattccctactgcaaagccaactgtggcagtcctgaccacggctactgtgacctg
acaggagagaagctctgtgtctgcaatgacagctggcagggtccagattgttctttgaac
gtcccctccacggagtcttactggatcctgcccaacgtgaagcccttcagcccctctgtg
ggccgtgcttcccacaaggctgtcctccacgggaagttcatgtgggtgattggaggatac
acctttaactacagctcattccaaatggtgttgaactacaatttggaaagcagtatatgg
aatgtagtgcctgtatccaaagggccactccagagatatggacacactcttgctttgtat
caggaagacatctacatgtacggaggcaaaattgaaacgagttatggcaatgtcactgat
gagctgtgggttttcaacatacccagccaaacatggagtaccagaattcctgcagtcctt
gtccatggacagcagtatgctgtggaaggtcattcagcacacatagtggagctggacagc
agagatgtggttatgattgtaatttttggatattcttccatttatggttacacaagcatt
gtgcaagaatactatatcaggtctaactcttggcttgtaccagaaacaaaaggagcaatt
gttcaaggtggatatggccataccagtgtgtatgatgaactgacaaaatctatttatgtc
catggtggatacaaagcattgcctggcaataaatacggattggtggatgatctttacaga
tatgaagttaatactcggacatggactattttgaaagagagtggctttgcaagatacctt
cattcagctgtcctaatcaatggagctatgctcatttttggtggaaacactcataatgat
acttccctgagcaatggtgcaaagtgtttttctgctgactttcttgcatatgatatagct
tgtgatgaatggaagattttaccaaaacctaatctgcatcgagatgtcaacagatttggt
cacacagctgttgtcagtaatgggtccatgtatatatttgggggtttttcaagtgttctg
ttgaatgacatccttgtgtacaagcctcccaactgtgaagcattcagagatgaagagctg
tgcaaaaacgcccgaccaggaataaggtgtctgtggaacaggaaacattgtgaatcttgg
gagtctggacatgctaataatatccttagagcaaaatgtcccaagaaaacagctgctgca
gatgacagatgttaccggtacgcggattgcgccagctgcaccgccaacaccaacggctgc
cagtggtgcgacgacaagaagtgcatttcagccaacagtaactgcagcatgtcagttaaa
aactacacgaaatgtcacgtgaggaatgagcagatctgcaataaactgacgagctgcaag
agctgctccctgcacctgaactgccagtgggaccagaggcagcaggagtgccaggcacta
cctgctcacctgtgtggagaaagatggaatcacattggagatgcctgcctccacataaat
tccagtcgggaaagctacgacaatgccaaactgtattgctacaatttgagtggaaatctt
gcatcactaacaacctcaaaagaagtggaatttgttctggatgaaatacagaagtataca
cttcagaaaatttcaccctgggtgggtttgcggaagatcaacatctcctactggggctgg
gatgacatgtcccctttcactaacaccaccctgcagtggctcccaggagagcccaacgac
tccggcttctgtgcctacctggagagagcagaggtggcagggctgaaggcaaatccctgc
actgccatggcagatggccttgtgtgtgaaaaacccgttgtcagtcccaaccagaatgcc
aggccctgcaaaaagccttgctccttgaggacaacctgttccaactgcaccagcaatggc
atggagtgtatgtggtgcagcagcaccaagcgatgcgtggactccaatgcctacatcatc
tccttcccctatggacagtgtctggagtggcaaactgccacctgctcccctcaaaactgc
tctgggctgaggacctgtggacagtgtttggaacagccagggtgtggatggtgcaacgat
cccagtaacactggcaaaggacagtgcttggaaggctcctcaagaggcccaatgaagcct
gtcagtgtccactccaatgaaatggtgcttgatgctactctttgcccaagagaaaaaaat
tatgagtggtcttttatccagtgtccagcttgccagtgtaatggccacagcacctgcgtc
aacagcaatgtctgtgatcagtgtaaaaacctaacaacaggaaaacagtgtgagacctgc
atgccaggatattatggggatcccacaaatggaggacagtgtacagcttgcacttgcagt
ggacatgcaaataactgtcacatgcaaacaggaaaatgtttctgcacgacaaagggaatc
aaaggagaccagtgtcaactctgtgactctgaaaataggtatcttggaaatccacttagg
ggaacatgctactacagccttttgattgattatcagtttaccttcagcctgttacaagag
gatgatcgtcatcacactgccataaactttatagcaaatccagaacagtcaaataaaaat
ttggatatatcaattaatgcatcaaacaactttaacctcaatattacatggtctattggt
tctacagctggtacaatatctggagaagaaattcctgttgtttccaaggttaatattaag
gaatacagagacagcttttcctgtgaaaaatttaactttcgaagcaacccaaacatcact
ttctatgtctatgtcagcaatttctcctggccaatcaaaatacagattgccttctcacag
cacaatactatcatggatctggtgcagttctttgtcaccttcttcagttgtttcttatcc
ttactgctggtagctgctgtcgtttggaaaatcaaacaaacctgttgggcttctcgacgg
agagagcaactgatgcgggagcgacagcagatggccagccgcccctttgcttctgtcgat
gtagcactggaagtaggagctgagcaaacagactttctacgagggccattagagggggct
cctaagccgattgccatcgagccgtgctcaggaaacagagccgccgtgctgaccgtgttt
ctgtgtctgcccaggggcccgtcaggagttccaccacctgggcagtcaggtcttgcaatt
gcaagtgctctgatagacatttcacaacagaagcctgcagactgtaaagataagagttca
ggagtcagaaatcgaaaacatcacctttcaacacgtcaaggaacttgtgtctga
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