Ficedula albicollis (collared flycatcher): 101818933
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Entry
101818933 CDS
T02815
Symbol
USP39
Name
(RefSeq) ubiquitin specific peptidase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101818933 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101818933 (USP39)
Spliceosome [BR:
fab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
101818933 (USP39)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101818933
NCBI-ProteinID:
XP_005058038
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All DBs
Position
22:343551..351486
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AA seq
676 aa
AA seq
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MAAPVPHGTHRPTEPLPTALHGAPALWYPPGPTALPPVPWDPHPQHPNAAGTCGTPMPWQ
HPLAHGTPSDRHPPQPHTQGTGNWRGECRGVRVGTRQGGGQHWGTRGCEGTLGCGGTLGT
LGRGGRSQGCPGGHQGEEGQDSLEERDGEWSVLGVLSSALGGICSQRGSLAPGRCSGRRG
RHPRAFGVLVPPLLTPSCPPVRYGRFDPEDQRSRHCPYLDTINKSVLDFDFEKLCSISLS
HINVYACLVCGKYFQGRGLKSHAYIHSVQLSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI
TYVLKPTFTAQHIAHLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL
RNYFLEEENYRHIQRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK
NFQITKQGDGVEFLSWFLNALHAALGGTKRKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE
KAQLLQNSEYQERMVESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFSILAKFNGSTEKE
YKTYKENFLKRFQLTRLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQ
AAHAHTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYI
QIWKRREEDETKQQGA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccagtgccccacggcacccaccgccccacagagcccctacccacagccctc
cacggagccccagccctgtggtacccaccgggccccacagcactgccccctgtcccgtgg
gacccccacccacagcaccccaatgcagcggggacctgtggcacccccatgccatggcag
catcccctggcccatggcaccccctccgacaggcacccaccgcagccccacacccagggc
acggggaactggaggggggagtgccggggtgtgcgtgtggggacacggcagggtgggggg
cagcactgggggacccggggatgtgaggggaccctgggctgtggagggacactggggact
ctggggcgggggggacggtcacagggatgtcccggcggacaccagggggaggagggacag
gacagcctggaggagagggatggggaatggagtgtcctgggcgtcctgagctcagctctc
ggcgggatttgcagccaaagggggagcttagccccaggcaggtgttccggaaggaggggg
cgtcaccctcgtgcttttggagtgcttgtgccccccttgttaacaccttcctgtccccca
gtgcgctacgggcgcttcgatcccgaggaccagcgcagccggcactgcccctacctggac
accatcaacaagagtgtcctggactttgactttgagaagctgtgctccatctctctgtcc
cacatcaacgtctacgcctgcctcgtctgtgggaagtacttccagggccgcgggctgaag
tcgcatgcctacatccacagcgtgcagctgagccaccacgtgttcctcaacctgcacacg
ctcaagttctactgcctgcccgacaactacgagatcattgactcctcgctcgaggacatc
acgtacgtgctcaagcccaccttcacggcccagcacattgctcatctggacaaacaggct
aagctgtcccgggcctatgatggcaccacgtacctgcctggcattgtggggctcaacaac
atcaaggccaatgactatgccaatgctgtgctccaggccttgtctaacgtgcctcccctg
cggaattacttcctggaggaggagaactaccggcacatccagcgcccacccggggacatc
atgttcctgctggtgcagcgctttggggagctcatgaggaagctctggaacccccggaat
ttcaaggcacacgtgtctccccatgagatgctccaggccgtggtgctctgcagcaagaag
aacttccagatcaccaagcagggggatggggtggagttcctgtcctggttcctgaatgcg
ctgcacgcagcactgggtggcaccaagaggaagaagaagaccattgtcaccgacgtgttc
cagggctccatgcgcatcttcaccaagaagctgccacaccctgacctgccggcggaggag
aaggcacagctgctgcagaacagcgagtaccaggagcgcatggtggagtccaccttcctg
tacctgaccctggacctgcccacggcgccactctacaaggacgagaaggagcagctcatc
atcccccaagtgcccctgttcagcatcctggccaagttcaatggcagcaccgagaaggag
tacaagacctacaaggagaacttcctgaagcgtttccagctgacacgcctgcccccctac
ctcatcttctgcatcaagcgcttcaccaagaacaacttcttcgtggagaagaaccccacc
attgtcaacttccccatcacgaacgtggacctgcgggaatacctgtcggaggaggtgcag
gcggcgcacgcgcacaccacctacgacctcatcgccaacatcgtgcacgacgggaagccc
tcggagggctcctaccgcatccacgtcctgcaccacggcacagggaagtggtacgagctg
caggacctgcaggtgaccgacatcctgccccagatgatcaccctgtccgaggcctacatc
cagatctggaagcgacgcgaggaggatgagaccaagcagcaaggtgcctga
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