Ficedula albicollis (collared flycatcher): 101818971
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Entry
101818971 CDS
T02815
Symbol
NPAS4
Name
(RefSeq) neuronal PAS domain protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101818971 (NPAS4)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101818971 (NPAS4)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS_4
PAS
HLH
PAS_9
PAS_2
DUF7750
Motif
Other DBs
NCBI-GeneID:
101818971
NCBI-ProteinID:
XP_005042868
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All DBs
Position
3:complement(7332480..7335045)
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AA seq
335 aa
AA seq
DB search
MTIFCSHCHRPLQAEMSCLPTRAKQAPSASRPFRSTKSASKARRDQINVELQALRSLLPI
SAQEKERLSYLHTMALVCLRLRGAQLFPPGLPPPAGPALGTELLSLLPGFLLVLSAESKL
VYISDNVAQVLGLSVVELLAQGDTVFDILDGQVGEDVHKKLLLAREEPGREVTFVSEMRT
SKAFRLQHGGNRVVAVCGRFVALRWPPSPSTTAFLALCTPLVQSPTDGEAASQDDVFQSM
HLLDMTFIDVTESVTYHLGYHREELVGQSWYSLLHPEDADLAAAQHRAVALEAGDGPAAG
SAVLRVLHKDRAWTWLRVWARRDGGCITCTCRCLR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcttctgcagccactgccaccggcccctgcaggcagagatgagctgcctgccc
accagggccaagcaggcgcccagcgcctcgaggcccttcaggtcaaccaagagtgcttcc
aaggctcgccgagaccagatcaatgtggagctgcaggcgctgcgctccctgctgcccatc
tctgcacaggagaaggagcggctctcctacctgcacaccatggccctggtgtgcctccgg
ctgcggggggctcagctgttccctccaggcttgcctcctcctgcaggaccagcccttggc
acagaactgctctccctgctcccggggtttctgcttgtgctctcagcagagagcaagctg
gtctacatctcagacaacgtggctcaggtgctgggcctctccgtggtggagctgctcgcc
cagggggacacggtctttgacatcctggatgggcaagtgggagaggatgtgcacaagaaa
ctcctccttgcccgggaggagcctggcagggaagtcacctttgtcagcgagatgcgcacg
tccaaggccttccggctgcagcacggggggaatcgggttgtggcagtgtgcgggcgcttt
gtggccctgcgctggccaccctccccgtccaccacagccttcctggccctctgcacaccc
cttgtgcagtcacccacagatggtgaagctgcttcccaggacgacgtattccagagcatg
catctcctggacatgacttttattgatgtcacggagagtgtcacctaccacctaggctac
cacagggaggagctggtcggtcagtcgtggtacagcctcctgcaccctgaggatgctgac
ctggcagctgcccagcacagggccgtggcgctggaggccggggatgggcccgcagcgggg
tccgccgtgctgcgagtgctgcacaaggaccgcgcctggacctggctgcgcgtgtgggcg
cggcgggacggcggctgcatcacctgcacctgccgctgcctcaggtga
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