Ficedula albicollis (collared flycatcher): 101819209
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Entry
101819209 CDS
T02815
Symbol
PDZRN4
Name
(RefSeq) PDZ domain containing ring finger 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101819209 (PDZRN4)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101819209 (PDZRN4)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
101819209 (PDZRN4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
101819209
NCBI-ProteinID:
XP_005039431
UniProt:
A0A803WBI7
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Position
1A:29025370..29260256
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AA seq
777 aa
AA seq
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MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPAAK
AHSSSQDVRLMDASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFY
EGNEYLSSLPADADRTEDFEYEEVELCRIGSQEKLGLTVCYRTDDEEDTGIYVSEVDPNS
IAARDGRIREGDRILQINGQDVQNKEEAVALLSSEECRKIVLLVARPEMQLEEGWLDDER
NEFLEELNLEMLEEQHNEAMQCTTNEVEQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTD
ESLRNDESSEQENATEEQNSATLQSKRDLGHSQDTLGSVELQCNESFVSGEYIESDFIGN
PEEECERFRQLLELKCKIRNHGEYDLYYSSSMIECNRREQDGVEHELQLLNEELRNIELE
CQNIMQAHRLQKVRDQYGDIWALHDESFRNYNTSKDVQRGKLDDIMEHPEKSDKDSSSAY
NTAESCRSTPLTVERSPDNSLQRVISITNRKNLRTTIVANQSSSGQNNRETTSAKTKPTE
QDSAAESTLLASEGSKFTDQERQGSEHIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQ
KSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIK
EERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGS
EGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcacttttcagaagagagaggaacactacaaactgctctatgaa
gtttcacaggtcaatgggaaggacctgtccaaggccactcacgaagaagcagtggaagcc
ttccgcaatgccaaggagcccattgtggttcaggttttacgacgagccccggctgccaaa
gcccacagcagctctcaggatgttcggcttatggatgccagcactcagactgacatcacc
tttgagcatattatggctctggccaagctaaggccctccacgccaccagttcctgatatc
tgcccttttctactttcagatagctgccattctcttcacccagtggagcatgaattttat
gaaggtaatgagtatctttccagcctgcctgctgatgcagatagaacagaggactttgag
tatgaggaggtggagctgtgccgcattggcagccaggagaagctggggctgactgtctgc
tacagaaccgatgatgaggaggacacaggaatctatgtcagtgaggttgatccaaacagc
attgctgccagagatggacggatccgtgaaggagaccgcattttgcaaataaatggccaa
gatgtccagaataaggaagaggcagtggcgttgctctccagcgaagaatgcaggaaaatt
gtgctgctggttgcgaggccagagatgcagctggaggaagggtggctggatgatgaaagg
aatgaattcttagaggagttaaacttggaaatgttggaagagcagcataatgaagcaatg
cagtgcacaaccaatgaggtggagcagccaaagaaacacgaagaggaagatggaactaca
gacactgcaacctcatcatctaacaatcatgagaaggacagtggggtgggacctacagac
gaaagtctcagaaatgatgagagctcagagcaggaaaatgcaactgaggagcagaacagt
gctaccctgcagagcaaacgggatctgggccacagccaggatacattaggcagtgttgag
ctccagtgcaacgaaagctttgtgtctggggaatacattgaatctgatttcataggaaac
ccagaggaagaatgtgaaaggtttcggcagctgttggaactgaagtgcaagattcgaaac
catggggagtatgatctttattactcaagcagtatgatagaatgcaacagaagagagcaa
gatggagtggagcatgagctgcagctacttaatgaggaactgaggaacattgagcttgaa
tgccagaatattatgcaagctcaccggctccagaaggtgagagatcagtatggagacatt
tgggctttacatgatgaaagtttcaggaattataacaccagcaaagatgtacaaagaggc
aagctggacgacatcatggagcaccctgagaaatctgataaggacagctccagtgcctac
aacactgctgaaagctgcaggagcactcctctgactgtggagcgatcccctgataactct
ctccagagggtgatcagcataaccaacaggaaaaacctgaggaccacaattgttgccaat
cagtcatcctcaggacaaaacaacagggagacaacctcagccaaaaccaaacccactgag
caggacagtgctgctgagagcacactgctggcatcagaaggcagcaaattcacagaccag
gaaaggcaaggcagtgagcacattccctatttgtctccatatcacagttcctcttacagg
tacgggaacatacctgctcatgcaaagcattatcaaagctatatgcaactgatccagcag
aagtctgctgtggagtatgcccaaagccagctcagcctggtgagcatgtgcaaagactca
cagaagtgtgcagagcccaagatggaatggaaagtgaaaataaggagtgatgggacgagg
tacatcacaaagagaccagtccgagacagaatcctgaaggaacgtgccttaaaaattaaa
gaggagcgcagtgggatgacgacagatgatgacacgatgagcgagatgaagatgggtcgc
tactggagcaaagaagagcgcaagcagcatttggtgcgtgctaaggagcagaggaggcgg
cgggagttcatgatgaggagcaggctggagtgtcttaaggaaagtccacagagtggcagc
gagggcaaaaaggaaatcaacattattgaactgagtcacaaaaagatgatgaaaaagaga
aacaagaaaatcttggacaactggatgacaatacaagaactgatgacacatggtgctaaa
tccccagatggcacaagagtgcacaatgcctttttatcagttactactgtatga
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