Ficedula albicollis (collared flycatcher): 101819342
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Entry
101819342 CDS
T02815
Symbol
JARID2
Name
(RefSeq) jumonji and AT-rich interaction domain containing 2
KO
K11478
protein Jumonji
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101819342 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101819342 (JARID2)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
101819342 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
101819342 (JARID2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
101819342
NCBI-ProteinID:
XP_005041632
UniProt:
U3KG69
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All DBs
Position
2:64499395..64716033
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AA seq
1235 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHSDGISGSLKAVN
GLLTNGQSKGLGPGSEQLENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPIKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPSNMVYFGSSQ
DDEDEEEEEEETEDTKTATNNASSSCQSTPRKGKTHKHVPNGQVFNGSSKSSKEKEPAQK
HKSKEATPGKERNSEHKAESRKDQAAANHHATTNTGSSTKGLTANNHHTLHRSAQDLRKQ
VSKVNGVTRMSSPSANAASAKKMREVRPSPSKTVKYTATVTKGTVTYTKAKKELVKETKL
NHHKPSSPVNHTISGKIESSNAKTRKQVLSLGASKSNNTAVNGVKVNGKLNQKTCTKEVG
RQLREGLRNSKRRLEETNHIDKIQSPTKRMKGAVNLAEAASKKAAVEKPLLNGHLRKEVP
EKSLERNRPKRATAGKSTPGKQAHGKTENASCENRSTSQAESLHKPQDSMGKHEKGSSKS
GWGMLGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVT
QIQHIHKLGRRWGPNVQRLACIKKHLKSQGITMDELPLIGGCELDLACFVQLINEMGGMQ
QVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHKKLEKEVLLEKEI
LEKRKGPLEGHSENAYKFHSLPRFEPKNGLINGVVHKNGFRNKLKEVDVPLKTGRRRLFA
QEKETTKEDEEEEEEGVLSDLHKCIYKGRSVSLTTFYRTARNIMNMCFTKEPTVAEVEQE
YWRIVEQKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAV
PGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAAEENKLDDVVHTLLQ
ANGTPGLEMLESNVMISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSESV
HFATTQWTSMGFKTAKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELR
DTELRQRRQLYEAGLHSSARYGSHDSSSAGADGKKKPRKWLQLETSERRCQICQHLCYLS
MVVQENENVVFCLECALRHVEKQKSCRGLKMMYRYDEEQIISLVNQICGKVSGKNGSIEN
CISKPTPKRGPRKRATVDVPSSRLSSSSSSKSASS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaagacccaagaggaatataattcaaaagaaatacgatgacagtgatggg
attccctggtcagaggagagggtggtgcggaaggtcctttatctatcactgaaggagttc
aagaatgcacagaagcggcagcacagcgatggcattagcgggagcctcaaggcagtgaac
ggacttctcactaatggccaatctaaaggattaggaccaggctcagaacagctggagaat
gagaaggatgatgcatcgcaagtgtcctcaacgagcaatgatgttagttcttcagatttt
gaagaagggccctcaaggaaaaggccaagactgcaagcacaaaggaagtttgctcagtcc
cagccaaacagtcccagcacaactccaataaagatagtggagccgttgttaccccctcct
gccactcagatttctgacctctccaaaaggaagcccaagacagaagattttctcactttc
ctctgtcttcgaggttctccagccctgcccagcaacatggtatattttggaagctctcag
gatgatgaggatgaagaagaggaggaggaggagacagaggacacaaaaacagccacaaac
aatgcttcatcgtcatgccagtcaacccctaggaaaggaaaaacacataaacatgtacca
aatgggcaagttttcaatgggtccagcaaatcatcgaaggagaaagaacctgctcagaaa
cacaaaagcaaagaggccaccccagggaaggagaggaacagcgaacataaggctgagagt
cggaaagaccaggctgctgctaatcaccacgctactacaaacactggctcctctacgaaa
gggctcacggctaacaaccaccacactcttcacagatcggctcaggacttaaggaaacag
gtttctaaagtcaacggggtcactcgaatgtcatctccgagtgcaaatgcagccagtgcc
aaaaagatgagagaagtcagaccttcaccgtccaaaactgtgaagtacactgcaacagtg
acaaagggaactgtcacatacaccaaagccaagaaagaactggtcaaggaaaccaaacta
aatcaccacaaacccagttcacctgtcaaccacacaatctcagggaaaatagaaagtagc
aatgcaaaaacccgcaaacaggtgctatcccttggagcatccaagtctaacaataccgct
gttaatggtgtaaaagtcaatggcaagttgaaccaaaagacatgcactaaggaggtgggg
agacagttgagggaggggctgcgcaattcgaagaggaggctggaagagacgaatcacata
gacaaaatacagtcgcccaccaagaggatgaaaggggccgtcaacttggcagaagctgcc
agcaaaaaggcagcagtagaaaagcctttgctgaatggacaccttagaaaggaagtgcca
gagaagagtttggaaagaaataggccgaaaagagccactgctggaaagagtacgccaggg
aaacaagcacatggcaaaactgaaaatgcctcctgtgaaaatcgttctacctctcaagcg
gagtccttgcacaagccacaagactcaatgggaaagcacgaaaagggcagtagtaagtct
gggtgggggatgctgggggagattcccatccttaggccctccaccaaggaatttcatgac
ccactgatatacattgagtcagtccgagctcaggtagagaagtatgggatgtgcagggtg
attcctcctccagactggagacctgagtgcaagctaaacgatgaaatgcggtttgtgaca
cagattcagcacatacacaagctaggcaggcgctggggacccaacgtgcagcggctggcc
tgtatcaagaagcacctcaaatctcagggcattaccatggatgaactcccactcatagga
ggctgcgagctcgacctggcctgcttcgtccagctgatcaacgagatgggggggatgcag
caagtgactgacctcaagaaatggaacaagctggcagacatgctgcgcatccccaaaact
gcacaggacaggctggccaagctacaagaagcctactgccagtacttgctctcctatgac
tccctctcccccgaggagcacaagaaactggagaaggaggtcttgctggaaaaggaaatc
ctggagaagaggaaaggacctttggagggacattcagagaatgcctacaagttccattcc
ttgccccggtttgagcccaaaaacggactcatcaatggcgtggttcacaaaaatggcttc
cgcaacaagttaaaagaggtcgatgtcccgctgaagacgggcaggcggcggctctttgct
caggaaaaggagaccacgaaggaggacgaggaggaggaggaggagggagttcttagcgac
ttacacaagtgtatatacaagggtaggtctgtttctttaacaaccttctaccgaacagca
agaaacatcatgaacatgtgcttcacaaaggaacctacagtagctgaagtggagcaagaa
tactggcggatagtggaacagaaagattgccatgtagcagtgcattgtggaaaagtagat
accaacacccatgggagtggctttcctgtgggaaaatcggaaccattttcaaggcatggg
tggaacctcacagtccttcctaataatacaggatccatcctgcgacatcttggtgctgtg
cctggagtgacaattccttggctaaatattggcatggtcttttctacctcatgctggtct
cgagaccaaaatcaccttccatacattgactacttacacactggtgctgattgcatttgg
tattgcattcctgctgcggaggagaacaaacttgatgatgtggtacataccctgctgcaa
gccaatggcactccagggctggaaatgcttgaaagtaatgtaatgatctccccagagatc
ttgtgtaaggaggggatcagggtgcaccgtactgtacagcagagcgggcagtttgttgtc
tgttttcctggatcctttgtgtccaaagtatgttgtggctatagtgtttctgaatcggtg
cactttgctaccacccagtggacaagtatgggctttaaaacagccaaggaaatgaagcgg
cgccgtatagccaaaccattctcaatggaaaagttgctttatcagattgcaacagcagaa
gcaaaaaaagaaaacggaccgactctgagtacgatatcatcgctcctgggagagctcagg
gacacggagctgaggcagcggcggcagctgtacgaggccggtctccactcctcggcgcgc
tacggcagccacgacagcagcagcgccggcgcggatggcaagaaaaagcctcgaaagtgg
ctgcagttagagacgtcagagaggaggtgccagatttgtcagcacctgtgctatctctcc
atggttgttcaggagaatgaaaatgttgtcttctgcttggagtgtgccctgcggcacgtg
gagaagcagaagtcgtgccgggggctgaagatgatgtaccgctacgatgaggaacaaata
atcagtcttgtcaatcaaatctgtggaaaagtatctggtaaaaatggcagcattgagaac
tgtatcagcaagcctacaccaaaaagaggacctcgtaagagagcgacagtggacgtgcca
tcatctaggctttcatcctccagttcatccaaaagtgcttcaagttaa
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