Ficedula albicollis (collared flycatcher): 101819343
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Entry
101819343 CDS
T02815
Symbol
CDH12
Name
(RefSeq) cadherin 12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
101819343 (CDH12)
Cell adhesion molecules [BR:
fab04515
]
Cadherins
Major cadherins
101819343 (CDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Stevor
Cadherin_4
ASFV_J13L
RIFIN
DUF443
Motif
Other DBs
NCBI-GeneID:
101819343
NCBI-ProteinID:
XP_005041715
UniProt:
U3JYQ4
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All DBs
Position
2:77310584..77467474
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AA seq
793 aa
AA seq
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MLTRNCLSLLLWVLFDGGLLTPLHTQPQAILEAQPRENVVPVPERRSSAQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGVGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDVDTKKPLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPETSHVGSAIGRIRAVDPDFGK
NAEIEYNIVPGDGGNLFDITTDEYTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SVGPFKDTATVKINVLDMDEPPVFSKPVYTMEVYEDTPVGTIIGAVTAQDLDAGSSPVRY
FMDWKNDVDSYFTIDSTEGTIATNELLDRESTAQYNFSIIASKVSNPLLTSKVNVIINVL
DVNEFPPEISVPYETSVCENAKPGQVIQTITAADKDLSPAGQRFSFKLSSEASNKPNFTV
HDYRNNTAGIETRRHGYSRRQQELYFLPIVIEDSSYPVQSSTNTLTIRVCRCDSDGTIQS
CNVEAIFLPVGLSTGALIAILLCIVILLVIVVLYVALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEDNKIRRDIKPDTLRFTRHRPPAEDNTDIRDFINQR
LKENDVDPSAPPYDSLATYAYEGNGSVAESLSSIDSLTTEADQDYDYLSDWGPRFKILAD
MFGEESYNPDKVT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgctcacaaggaactgcttatccctgcttctctgggtcctgtttgatggaggcctccta
acaccactgcatacacaaccacaagcgattttagaagcacagccaagagaaaatgttgtc
ccagtgccagagaggagatcatctgcccagcgagtcaagcgaggctgggtgtggaatcaa
ttttttgtgctggaggagtacatgggctctgaacctcaatatgtgggaaagcttcattct
gacttggacaagggagtgggcactgttaaatataccctttcaggagatggtgctggcacg
gttttcaccatcgatgagaccacaggagatattcatgccataaggagcctagatcgagaa
gaaaaacctttctacacactccgggctcaggctgtggatgttgacaccaagaaaccccta
gagcctgaatcagagttcatcatcaaagtgcaggacattaacgataatgagccaaaattt
ctggatgggccttatgttgccagtgtcccagaaatgtctccagtgggagcatatgtgctt
caagtaaaggcgacagatgctgatgatcccacttatggaaacagtgctagagtggtttac
agcattcttcaggggcaaccatatttctccattgatcccaagacaggtgtaataagaaca
gctttgccaaatatggacagagaagtgaaagaacaatatcaagttctaatccaagccaag
gacatgggaggacagctgggaggactagctggtactaccactgtaaacattactctcacg
gatgtcaacgacaacccacccagatttccgaagagtatcttccatttaaaagtacctgaa
acctctcatgttggttctgctattggacggatcagagctgtggaccctgattttgggaaa
aatgcagaaattgagtacaacatagttccaggagatggaggaaacttgtttgacatcaca
acagatgagtacacccaggaaggagtcattaaactgaaaaagccattagactttgaaact
aagaaggcatacacctttaaggtggaggcctccaatctccatcttgaccatcggtttcac
tcagtgggtccattcaaagatactgccactgtgaagataaatgtgctggacatggatgaa
cctccagtgttcagcaagcccgtgtacacgatggaagtctatgaggacacacccgtgggg
accattataggtgcagtgactgcacaagaccttgatgctggcagcagcccagttagatac
ttcatggattggaagaatgatgtggacagctactttacaatagactctactgaaggaacc
attgctactaacgaattactggacagagaaagcacagcacaatacaatttctctataatt
gcaagtaaagttagtaacccactattaaccagcaaagtcaacgttataataaatgttttg
gatgtcaacgagtttcctcctgaaatttcagttccatatgagacatctgtatgtgaaaat
gccaagccaggacaggtgatacagaccatcactgcagcagataaagatttgtcaccagct
gggcaaaggttttccttcaaactgtcatctgaggcttccaacaaaccaaactttacagtc
catgactacagaaacaatacagctgggatagaaaccaggagacatggctacagccgaagg
cagcaagagctgtactttcttccaatagtaatagaagacagcagttaccctgtccagagc
agcacaaacactttgactatccgtgtttgcagatgtgattctgatggcaccatccagtcc
tgcaacgtggaagcaatcttcttaccagttggcctcagcacaggagctctgattgcaatc
ttgttgtgtattgttatacttctagtcattgtggtactgtatgtagcactacggaggcag
aagaaaaaggacaccctgatgacctctaaagaagacatcagagataatgttatccattat
gatgatgaaggaggtggagaagaggacacccaggcttttgacataggagccctgaggaat
cccaaagtgattgaagataacaaaatacgcagggacataaaaccagacactttgcgtttt
acacgccacagaccaccagcggaagataacacagacataagagatttcattaatcaaagg
ctgaaggaaaatgatgtagatccatctgcacccccttatgactccttggcaacctatgct
tatgaaggaaacggatctgtcgcagagtctctcagctctatagactccctcactacagag
gcagatcaggactatgactatctgagtgactggggacctcgctttaagatcttggcagat
atgtttggagaagaaagttacaacccggacaaagtcacttaa
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