Ficedula albicollis (collared flycatcher): 101819385
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Entry
101819385 CDS
T02815
Symbol
GRIN2A
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04020
Calcium signaling pathway
fab04080
Neuroactive ligand-receptor interaction
fab04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101819385 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101819385 (GRIN2A)
04082 Neuroactive ligand signaling
101819385 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fab04040
]
101819385 (GRIN2A)
Ion channels [BR:
fab04040
]
Ligand-gated channels
Glutamate (ionotropic)
101819385 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
101819385
NCBI-ProteinID:
XP_005054129
UniProt:
U3JN01
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Position
14:complement(6145492..6305379)
Genome browser
AA seq
1458 aa
AA seq
DB search
MRKIGCALLVLQALLAPLDLVRGAEKNYPILNIAVILGRTKYITERDIRALWTREMSADL
TVDINVVTLLVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAVAQILDFISSQTSIP
ILGIHGGASMIMADKDVMSTFFQFGASIQQEAIIMLKIMQDYDWHVFSLVTTTFPGYRDF
INVIKTTVENSFVGWDMQNIIILDTAFGDAKTQIQLKKIHSSVILLYCSKDEAVYILDEA
RSLGLTGYDFFWIVPSLVSGNTEITPKEFPSGLISAAYDEWDYSLEARVRDGLGVIATAA
SAMLEKYSFIPEARTSCYGQLEKNDRPSQTLHKFMMNVTWEGRDLSFTADGYQAHPRLVV
IVLNNERQWEKVGKWENNSLSLKYSVWPRYSSFADSDPDDNHLSIVTLEEAPFVIVEDVD
PLMESCQKNTVPCRKFVKLNNKTNEGTNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNG
KHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT
VSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAQGRDPHGPSFTIGK
AVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVT
GLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPDMHLYMTKFNQKGVEDALVSLKTG
KLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFV
GDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYW
KLRFCFTGVCSDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFSLTNSQTNMLKLLRTAKN
MTNINPPRIDSPKRTADFIQRGSLIMDMVMDKGNLVFSDNRSFQTKDNFFGDNISELQTL
PGNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVTTEAKVNSRPRQLWMKSVESLRQDSV
RQGQGSQRENGSEENRQLSLKSQRYLPEEIVHSDVSETSSRATCHMEAENNNKHHKTKDN
FKKRTVASKYPKDCSEVELTYLKTKPGSPRDKIYTIDADKEPGFHLDTPQYIENIVLPEP
VELPDVYQDHNDNYRKAEHANRTPSQNEDSLPNNDQYKLYAKHYTLKEKNASLGDMNDRY
RQNSTHCRSCLSNMPTYAGHYSTRSPYKCDACLRMGNLYDIEEDQMLQDTTNLSLPEEIY
ERTWSQSSALQYHKKNKLKISRQHSYDNIADKSREIDIGRPSRSISLKEREKFLQSSPYA
SMFSVPSSKLLSNKASLLTHALEDSKRSKSLYAVHSDDNPFLHTYRDDQHLSLRRSPADL
YKHSLPTRGRNDNYLRSSIQSTASYSSRDGRIHNDMYISEHVLPYVANRNSLYSTSRVLN
SCSNTRVYKKRPSIESDV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaattggctgtgctctcctggtactccaagctcttctggcacctttggatctt
gttcgtggagcagagaaaaactatcccatcctgaacattgcagtgattctgggaaggacc
aaatatataacggagagagatatcagagctctctggacccgggaaatgtcagcagacctg
actgttgatatcaatgtagtgacccttcttgtgaaccagactgaccccaagagcatcata
acacatgtttgtgacttgatgtcaggcaccaagatccatggagtggtttttggagatgac
acagatcaggaggcagtagctcagattttggattttatttcatctcagacttctattcca
attcttggaattcatggcggggcctccatgataatggcagataaggatgtcatgtccacg
ttcttccagtttggggcttccatccagcaagaagccattatcatgctgaagatcatgcag
gattatgactggcacgtattctctctggtgaccaccactttccctggatatcgagatttc
atcaatgtcattaagaccactgtggaaaacagttttgtgggctgggacatgcagaacatc
atcatactcgatactgcctttggagatgccaagacccaaattcagctgaagaaaatccat
tcatctgtcatcctgctgtattgttccaaggatgaagctgtctacatcctggatgaggct
cggtccctgggccttactggctatgatttcttttggatagttcccagcctggttagcggt
aacacagaaatcactcccaaggagtttccttcaggactcatttcagcagcctatgatgag
tgggactacagtttagaagctcgggtacgggatggcctgggggttattgccactgctgca
tcagccatgctggagaagtactccttcattcctgaagcaagaacgagctgctatgggcag
ctggagaaaaatgaccggccctctcaaacgctgcacaagtttatgatgaatgtgacgtgg
gaaggcagagatttgtccttcacagcagatggttaccaggcacaccccaggctggtggtg
atcgtgctgaacaacgagcggcagtgggagaaggtgggcaagtgggagaacaactccctg
agcctgaagtactcagtgtggccaaggtacagctccttcgccgacagcgaccccgacgac
aaccacctgagcattgtcaccttggaggaggctccctttgtcattgttgaggatgtggat
cctctcatggaaagctgccaaaaaaacactgtgccatgccggaaattcgtcaaacttaac
aacaaaactaatgagggaactaacgtaaagaagtgctgcaaaggattctgcatcgatatc
ttgaagaagttgtctaaaactgtcaagttcacatatgacctgtacttggtgacgaatggg
aagcatggcaaaaaagtcaataacgtgtggaacggaatgattggtgaagtggtgtatcag
cgggcagtcatggctgtgggctccctcaccatcaatgaggagcgctccgaagtcgtcgac
ttttcggtgcccttcgtggagactgggatcagtgtcatggtgtcccggagcaacggcacc
gtttcaccatctgcttttctagagccttttagtgcttctgtctgggtgatgatgtttgtg
atgcttctcatcgtgtctgccatggctgtctttatatttgagtactttagtcctgtagga
tacaacaggaacttagcacaagggagagatccccatggcccatcctttaccattgggaag
gcggtgtggttactgtggggcttggtcttcaacaactctgtgcctgtgcaaaaccccaag
gggacgacgagtaaaatcatggtgtcagtctgggctttctttgctgtcattttcctggcc
agttacactgccaacttagctgcctttatgattcaagaggaatttgttgaccaagtgact
gggctgagtgataaaaagtttcaaaggccacatgattattcacctccttttcggtttgga
acggtcccaaatggaagcactgagaggaatatccgaaacaactaccctgatatgcacctt
tatatgaccaagtttaaccagaaaggagtcgaagatgccttggtcagcttgaaaactggg
aagttggatgctttcatctatgatgcagcagtgctgaattacaaggctggaagagatgaa
ggctgcaaacttgtcacaataggcagtgggtacatctttgccactactggctatgggatt
gctctccagaaaggatcaccttggaagagacaaattgatctggccctccttcagtttgtg
ggagatggggaaatggaagagttagaaaccctgtggctgactggtatttgtcacaacgag
aagaatgaagtcatgagcagccagctggacatcgacaacatggcaggagtgttttatatg
cttgcagcagccatggcactcagcttaataacctttgtctgggagcacttattttactgg
aaactgagattctgcttcactggagtctgctcagataggccgggattgctgttctcaatc
agcaggggtatttacagttgcattcatggagtacacattgaagagaaaaagaagtctcct
gacttttctttgaccaattcacaaaccaacatgttaaaactgctgcgaacagcgaaaaac
atgaccaacatcaatcctccaaggattgactcccccaaaagaacagctgactttattcag
aggggttctttaattatggacatggtcatggataagggaaacttggtattttctgataac
agatcctttcagacaaaggacaacttttttggtgacaacataagcgaactgcagacactt
cctggcaatcgacacaaggacaatctgaacaactatgtttttcaagggcagcatcctctc
acactgaatgaatccaatccaaatacagtagaggttgcagtaacaacagaagcaaaagtg
aactccaggcccaggcagctttggatgaaatctgttgaatctttacgccaagattctgta
cgtcagggccaaggttcccagagagaaaatgggtcagaggaaaacaggcagctttcactg
aagagccagagataccttcctgaagagattgtccattcagatgtgtcagagacatcaagc
agagctacttgccacatggaagctgaaaacaacaacaagcaccacaaaaccaaggacaat
ttcaaaaaaaggacagtagcatcaaaatacccaaaagactgtagtgaagtggagctgaca
tatctgaaaaccaaaccgggctctccacgggataaaatctacacaattgatgctgacaag
gagccaggattccacttggacacacctcagtacatcgaaaacattgtccttccagaacct
gtcgagcttcctgatgtttaccaagatcacaacgacaactacaggaaagccgaacatgct
aacaggactccatcacagaatgaagacagtcttccaaataatgaccagtataaactttat
gcaaagcactacactctcaaagagaaaaatgcttccctaggtgacatgaacgataggtac
agacagaattccacccactgcaggagctgtctctccaacatgcccacgtacgcggggcac
tactcgaccagatctccctataaatgcgacgcgtgcttgcgcatggggaacctctatgat
attgaggaagatcagatgctgcaggatacaacgaacttatcgcttcctgaagaaatatat
gagcgtacttggtcacaaagtagtgctctgcaatatcataaaaagaataaactgaagatt
agcaggcaacactcttatgataatatcgctgataagtccagggaaattgatattggaaga
ccttctcgtagtataagcttgaaagaaagagagaagtttcttcaaagtagtccatatgca
agcatgtttagtgttccctcaagcaaactgttgagcaacaaggcctcacttttaactcat
gctctggaggacagtaagcggagcaagtctctgtatgctgttcactcggatgataaccct
ttcctgcacacctatcgtgatgaccagcatttatcccttaggcgaagtccagctgatctt
tataaacattcattgccaacaagaggaagaaatgataattatttaaggtcatccatacag
tctacagcatcatactcttccagggatggtcggatccataatgacatgtacatttcagag
catgttttgccttacgttgcaaataggaatagcttgtactcaacttcaagggttttaaat
tcctgtagcaatacacgtgtgtataagaaaaggcctagcattgaatcagatgtttaa
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