Ficedula albicollis (collared flycatcher): 101819492
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Entry
101819492 CDS
T02815
Symbol
SEMA6D
Name
(RefSeq) semaphorin 6D
KO
K06842
semaphorin 6
Organism
fab
Ficedula albicollis (collared flycatcher)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
101819492
NCBI-ProteinID:
XP_005051992
UniProt:
A0A803W1Q6
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Position
10:complement(13411504..13548821)
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AA seq
1088 aa
AA seq
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MRLPALCALVTLLSLSRCRAVSFPEDEDPINVVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYITGRDQVYTVNLNEVPKSEVIPSKKLTWRSKQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNTLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIEINGVPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPSVTEEPWFTKTRVRYR
LTAIAVDHAAGPYQNYTVIFVGSEAGVVLKILAKTRPFSLNDSILLEEIEAYNHAKCNAE
SEEDRRVISLQLDREHHALFVAFSSCVVRIPLSRCERHGSCKKACIASRDPYCGWLDHEA
CGRVTPGMLFSLFVSYNHSTGGYLQDVEYGNTAQLGDCHEILPTTATPDYKIFGDPTSDM
EFSSASITTMASIPVISPKVIGSWKPKVTGSRKFVVQDDPNTSDYSDPLSGVPKGVRWEV
QSGESSQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDIFVRKSRKIHKDAESAQSCTDS
SGSFAKLNGLFDSPVKEYQQNIDSPKLYTNLLTSRKELPPNGDTKSMMMDHRGQPPELAA
LPTPESTPVLQQKTLQAMKSQSDKAHGNLNASRKETPLKSPQFFPSSPPPHSPLSHGHIP
SAIVLPNATHDYNTSFSNSNAHKADKKMQHMDHPLTKSSSKRDHRRSVDSRNTLNDFLKH
LNETTNNPKAIMGDIQVAHQTLMLDPMGNMSEIPPKVPNREASLYSPPSTLPRNSPTKRV
DVPTTPAVPMTSLERQRGYHKNSSQRHSISALPKNLNSPNGVLLSRQPSINRGGYMAPTA
GTKMDYMQGTPVSVHLQPSLSRQSSYTSNGTLPRTGVKRTPSLKPDVPPKPSFVPQTTSV
RPLNKYSY
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcccggcgctctgtgccttggtgacgctgctcagcctgtcccgctgccgcgcc
gtcagcttccccgaggacgaggaccccatcaacgtggtggactaccactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgaatctcagcacagactggacttccaa
ctaatgttgaaaattcgagacacactttatattactggcagggaccaggtttacactgta
aacttaaatgaagttccgaaatcagaagttatcccaagcaagaaattaacatggagatca
aagcaacaggacagagagaactgtgctatgaaaggcaaacacaaagatgaatgccataac
ttcattaaagtctttgttccaagaaatgatgagatggtgtttgtctgtggaacaaatgca
tttaaccctatgtgcagatactatcggttgaatacattagagtatgatggggaggaaatt
agtggtttggcaagatgcccatttgatgccagacaaaccaatgtcgccctctttgctgat
ggaaaattgtattcagcaacagtagcagatttcctggcgagtgatgctgttatttatcgc
agcatgggggatggatctgccttaagaacaataaagtatgactccaaatggataaaagaa
ccacacttcctccatgccatagaatatgggaactacgtttatttcttcttccgagaaatt
gctgtagagcacaacactttaggcaaggctgtgtattcccgtgtggcacgcatctgcaaa
aatgacatggggggctcccaaagggtcctggagaagcactggacatcctttctgaaagct
cggctcaactgctcagttcctggggattcattcttctactttgatgttctgcagtctatc
acagacataatagaaatcaatggagtgcccactgttgtgggtgtattcaccacacagctc
aacagcatccctggttcagcagtgtgtgctttcagcatggatgacattgagaaagtcttc
aaagggagatttaaagaacaaaagactcccgactctgtttggacagctgttcctgaagac
aaagtcccaaagccaaggcctggctgctgtgcaaaacacggcctagcagaggcttacaaa
acctccattgacttcccagatgaaaccctctccttcatcaaatctcatcctttgatggac
tcagctgttccctcagtcactgaggagccctggtttaccaaaacacgtgtcagatacaga
ttgacagcaattgctgtagaccacgctgctggaccctaccagaactacacagtcatattt
gttggctctgaagcaggagtagtacttaaaatcttggcaaagaccaggcctttttctttg
aatgacagcatattactggaagagattgaagcatataatcatgcaaagtgtaatgcagag
agcgaggaggacagaagagtcatttccctccagctggacagagagcaccatgctctgttc
gtggcattctccagctgcgtcgttagaattcccctgagtcgctgcgagcgccacggctca
tgtaaaaaggcatgtattgcttcacgggacccgtactgtggctggttagaccatgaggcg
tgtggaagagtgacaccaggcatgctgttctctttgtttgtttcatacaaccacagcact
ggaggatacctacaagatgttgaatacggcaacacagcacagcttggggactgccatgaa
attttgcctactacagctacaccagattacaaaatatttggcgacccaacatctgacatg
gagttctcctcagcttccattaccacaatggcaagtatcccagttatatcacctaaagtg
attggttcctggaaacctaaagtgactggctctcggaaatttgtagttcaagatgaccca
aacacttctgattattctgatccattatcaggtgtcccaaagggtgtgaggtgggaagtg
caatcaggagagtccagccaaatggttcatatgaatgtgctaatcacttgtgtctttgcc
gcttttgtcctgggagcctttatcgcgggagtggccgtttactgttaccgggatatattc
gtacggaaatccaggaaaatccacaaggatgcagaatcggctcagtcctgcactgactcc
agcgggagctttgccaaactcaatgggctgtttgacagtcctgtcaaggagtatcagcag
aacattgattcgcccaaactgtacacaaacctgctgaccagcagaaaggagttgcctccc
aacggtgacaccaagtccatgatgatggaccacaggggccagcctccagaattagctgca
cttccaactcctgaatccacaccagttcttcaacaaaagaccctgcaggctatgaagagt
cagtcagacaaagcgcacggtaacctcaacgcttcacgaaaggaaactccactaaaaagc
cctcagttttttccttctagtcctccaccccactctcctctaagtcatggacatattccc
agtgctattgttcttcccaatgctacccatgactacaacacatctttctcaaattctaat
gcgcacaaggcagacaaaaagatgcaacacatggatcatccacttacaaaatcatccagc
aaaagagaccacaggagatctgtcgattccaggaacaccctgaatgattttctgaaacac
ttaaatgaaactactaataatcccaaagcaattatgggagatatccaagtggcccaccag
actttaatgctggatccaatgggcaatatgtctgagatcccacctaaggttcccaacagg
gaggcgtctttatactctcctccatcgaccctgccgagaaacagtcccacaaaacgagtg
gacgttcccaccactcctgcagtaccaatgacctctttggaaaggcagaggggttatcat
aaaaattcttcacagaggcactcaatatctgcccttcctaaaaacttgaactcaccaaat
ggtgttttgttatccagacagccaagtattaatcgtggggggtacatggctcccacggca
ggcacaaagatggactacatgcaagggacgcctgtcagcgttcacctccagccttccctg
tccaggcaaagcagctacacgagcaatggcaccctgcctcgtacaggagtaaagaggaca
ccctccctaaaacccgacgtgccaccaaaaccctcgttcgtccctcagacgacgtcagtc
agaccactgaacaaatacagctactag
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