Ficedula albicollis (collared flycatcher): 101819581
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Entry
101819581 CDS
T02815
Symbol
POLR2J
Name
(RefSeq) RNA polymerase II subunit J
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03020
RNA polymerase
fab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101819581 (POLR2J)
09124 Replication and repair
03420 Nucleotide excision repair
101819581 (POLR2J)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101819581 (POLR2J)
03400 DNA repair and recombination proteins [BR:
fab03400
]
101819581 (POLR2J)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101819581 (POLR2J)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101819581 (POLR2J)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
101819581
NCBI-ProteinID:
XP_005056548
LinkDB
All DBs
Position
19:complement(5270329..5272019)
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AA seq
120 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVRIFFFKTIWVCCN
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgcctccggccttcgagtccttcctgctcttcgagggcgagaaaaagatcacc
atcaacaaggacaccaaggtgcccaacgcctgcttgttcaccatcaacaaggaggaccac
acgctggggaacatcatcaagtcgcagttgctcaaagacccgcaggtgttgtttgcaggg
tataaggtcccacaccctctggaacacaaaattatcatccgtgtccaaaccaccccggat
tacagcccccaggaagctttcaccaatgccatcacagacttgatcagtgaactctccctc
ctggaagagaggttcagggtaaggatattttttttcaaaactatttgggtttgttgtaat
taa
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