Ficedula albicollis (collared flycatcher): 101819721
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Entry
101819721 CDS
T02815
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
101819721
Cell adhesion molecules [BR:
fab04515
]
Cadherins
Protocadherins
101819721
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
MreC
Motif
Other DBs
NCBI-GeneID:
101819721
NCBI-ProteinID:
XP_016161206
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Position
Un
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AA seq
659 aa
AA seq
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MAIARQVLCLSAFLALPLARAEPIRYSVAEEAESGSLVGKLAEDAGLTPPQLSARRARLL
SEDGRQHLRLDRGSGRLLVAGRLDREELCAHSATCMLPFELLLSDPLQFFRVEVTLNDIN
DHSPLFHKEQITLKILETSETGSRFPLERARDLDIGSNSIQAYRISPENEYFSVSYGSRS
EDDKYLELVLEKALDREEQAEMSFKVIAEDGGSPPRSGTTQVKIVILDVNDNAPVFTQQG
YIGKVLENMPEGSVILTVLATDQDAGVNGDISYEITELVGQSDSPFVIDPRTGEIKLTKP
LDFEEAVTHELIVRATDGGGLSAICKVLVEVVDVNDNAPELAVSSFSSPLPENTVPGTVV
ALFTVRDRDSGANGKISCALDDQLFFSLRPAYKNYYELVTVSALDRERTARYVLGVTAAD
AGSPPLTSTHTFTVDISDVNDNAPVFNQTSYTMYVRENNAPTVFVGAVSAADADVGLNAK
VTYSLAPVPAAERPSCSCISVNSENGHVFVLRPLDYERLRQSEVTVSASDAGSPPLRANV
TVRLVVLDENDNAPLVLYPAQDGSAASSELVPVSAEPGYLVTKVVAVDADSGQNSWLSYH
LLRATEPGLFSVAVQSGEVRLKRPVTERDSAKHKLLVLVRDNGKPPLSATAALSALLLK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctctgctttcctggcgctgccgctcgctcgc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtcggcaag
ctggcggaggacgcggggctgacgccgccgcagctctcggctcgccgcgcccgcctgctc
tcggaggacggccggcagcatttgcgcttagaccgcggctccggccgcctcctcgtggcg
gggaggctcgaccgggaggagctgtgcgcccactcggccacctgcatgctccccttcgag
ctgctgctctccgacccgctgcagttctttcgggtcgaagtgactctaaacgatatcaat
gaccattcaccccttttccataaagaacaaatcactttaaaaattctggagacgagcgag
acaggctctcgtttcccacttgagagggctcgggatctcgatattggcagtaatagcatc
caggcgtacagaatctctccagagaatgagtactttagtgtctcctatggcagtcggagt
gaggatgataaatatcttgaactggtgttggaaaaggcgctagatagggaggagcaggca
gagatgagtttcaaagttattgctgaagatgggggctctcctccaagaagtggcaccacc
caagtgaaaattgtcattctagatgtaaacgataatgctcctgtgttcacacagcagggg
tatattggaaaggtgctggagaacatgcctgaaggttctgtgatcctgactgtgctggca
accgatcaggatgcgggagtcaatggggacatttcctatgaaatcactgaattagtgggg
cagagcgactcaccatttgtgattgatcccagaacaggcgaaattaaactcacaaaaccc
ctggatttcgaagaagcagtgactcacgagttgattgtgagggctacagatggtgggggg
ctctcggctatctgcaaagtgctggtggaggtggtggatgtgaatgacaatgccccagag
ctggcggtcagttccttcagcagtcccctccccgagaacacggtgcccggcaccgtggtt
gccctgtttacggtcagggaccgcgattctggtgccaacgggaagatctcgtgcgccctg
gacgatcagctcttcttctccctgcggccagcctataagaattactacgagctggtgaca
gtgagcgcgctggaccgcgagcgcacggctcgctacgtgctcggtgtcacagccgcagat
gcgggctcgccgcctctcacgagcacgcacaccttcaccgtggacatctcggacgtcaat
gacaacgcgcccgtcttcaaccagacctcctacaccatgtacgtgcgggagaacaacgcg
cccacggtgtttgtgggagccgtgagcgctgcagatgctgacgtggggctcaatgccaag
gtgacctactcgctggccccggtgccggcggcagagcggccctcgtgctcctgcatctcg
gtgaactcggagaacggacacgtgtttgtgctgcggccgctggactacgagcgcttgcgg
cagagcgaggtgacggtcagcgcctctgacgcgggctctcctcccctgcgagccaacgtc
accgtgcgcctcgtggtgctggacgagaacgacaacgcgccgctcgtgctctacccggcc
caggacggcagcgcagcgtccagcgagctcgtgcccgtgtcggctgagccgggctacctc
gtcaccaaagtggtggccgtcgatgccgactccggacagaactcctggctctcgtaccac
ctgctcagggccaccgagcccggcctgttcagcgtggctgtgcagagcggcgaggtgcgt
ctcaagaggccggtgacggagagggacagcgccaagcacaagctcctcgtcctggtcagg
gacaacggcaagcccccgctgtcagccaccgcggctctgagcgcgctcctgctcaag
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