Ficedula albicollis (collared flycatcher): 101819729
Help
Entry
101819729 CDS
T02815
Symbol
ARFGEF1
Name
(RefSeq) ADP ribosylation factor guanine nucleotide exchange factor 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101819729 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101819729 (ARFGEF1)
Membrane trafficking [BR:
fab04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
101819729 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
101819729
NCBI-ProteinID:
XP_005042170
LinkDB
All DBs
Position
2:complement(121883185..121971197)
Genome browser
AA seq
1843 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHGEAKS
GSSTLPPVKSKTSFIEADKYFLPFELACQSRCPRIVSTSLDCLQKLIAYGHLTGNAPDST
APGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQQHHLQQSPVSHHE
PESPQLRHIPAQADQLSKDHERELDHSTSDVDKNLQEDIEAENGSDISSAENEQTEADQA
TAAENLSKADGGTYDGESNECEEKAQEIVESIVQEMVNIVVGDVEGTASGDGTTVSLEDG
SDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPTPGAKFSHILQKDAF
LVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQY
LCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDH
KWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQ
ELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPTEQDSNETKHPETINRYGS
LNSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQG
MLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMF
LEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVK
NKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQSVASE
KQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGL
QDCDDTEVASLCLEGIRCAIRIACIFNIQLERDAYVQALARFTLLTVSSGITEMKQKNID
TIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSFTGTK
DQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFV
RWLCAVSMDELLSATHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNE
DVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQMV
NSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTIVFEKHFPATIDSFQDAV
KCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRGWFP
ILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQ
TEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNCL
ENVVILNGEKFTLEIWDKTCTCMLDIFKTTIPHALLTWRPAGGEFCSGSPSDAKEKLDTI
SQKSVDIHDSIQPRSADGRPYQPSPGATVAEETSKARPAAKFPEQKLFAALLIKCVVQLE
LIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVHVDTQDQGMYRFLTSQQLFKLLDCL
LESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDESRTSA
WEEVQHRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDERFKAHASFYYPL
LCEIMQFDLIPELRAVLRRFFLRIGVVFQISQPPEQESGLSKH
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagggaagaagacgaaaaacatgtttctgacccgggccctggagaagatcctg
gccgacaaggaggtgaagaaggcgcatcactcccagctgcgcaaagcctgcgaggtggca
ctagaggaaataaaggctgaaacagaaaagcaaagtccccctcatggagaagcaaagtct
ggttcaagcactcttccacctgtgaaatcaaagacaagcttcattgaagcagacaaatac
ttcctaccatttgaattggcatgccagtccaggtgccccaggattgtcagtacatctcta
gattgtttacagaaacttatagcatatgggcacttgacagggaatgctccagacagtaca
gctccaggaaaaaaactaattgatagaattatcgagacaatatgtggctgttttcaaggc
cctcaaacagacgaaggggttcagctacaaataataaaggctttgctcactgcagtaaca
tctcaacatatagaaatccacgaaggaacagtactacaggctgtaagaacatgttacaat
atctacttggcaagcaaaaatcttataaatcaaactacagccaaggccactctaacacaa
atgctgaatgtcatttttgcacgtatggaaaatcaagcacttcaggaagccaaacagatg
gaaaaggaaagacacagacagcaacatcatctccagcagtctccagtaagccatcatgag
cctgagtcacctcagttgagacatattccagctcaggctgatcagctgtccaaagaccat
gagagagagcttgaccacagcacaagtgatgtggacaagaaccttcaagaagatattgaa
gcagaaaatggatctgacatttctagtgctgaaaatgaacagacagaagctgaccaagcc
acagcagcagaaaatctttctaaagctgatggaggaacatatgatggtgaaagcaatgag
tgtgaagagaaggcacaagaaattgtagaaagtattgtgcaggaaatggtgaacatagta
gttggagatgtggaagggactgcgagtggtgatggtacaactgtatcattagaggatggc
agtgacagtgaaaacattcaggcaaatggaattccagggactcctatttctgttgcttat
acaccatctttacccgatgacagattatctgtctcttccaatgatactcaggaatctgga
aattcttcaggacctacccctggtgctaagttttcccacattttacaaaaggatgccttc
cttgtattcaggtcactgtgtaaactctctatgaagcccctgtctgatggaccacccgat
ccaaaatctcatgaactgcgatcaaagattctttcgttgcagttgcttctgtccattctg
caaaatgcaggaccagtcttcaggacaaatgagatgttcattaatgctataaagcagtac
ctctgtgttgcactgtcaaaaaatggagtctcatcagttccagaagtttttgaactttca
ctttccatatttctgaccctcctgtcaaacttcaagactcatctaaagatgcagattgag
gttttcttcaaagaaattttcctgtatatcttggaaacttctactagctcatttgatcat
aagtggatggttatacaaacgctgacaaggatatgtgcagatgctcagagcgtggtggat
atctacgtgaactatgattgtgatttaaatgcagcaaacatatttgaaaggctggttaat
gacttatcgaagattgctcaaggaaggggtagccaagaacttggcatgtccaatgttcag
gaattaagtttgaggaaaaaaggattagaatgcttagtatcgatcttgaaatgcatggtg
gagtggagtaaggatcaatatgtaaatcccaattcccagacaacccttggccaagaaaaa
ccgacagaacaggacagcaatgaaaccaaacaccctgagacaattaacagatatggaagc
ttaaattctttggattctactgcttcatcaggaattggcagttacagcacacagatgtct
ggcactgacaacccagagcagtttgaagtcctaaagcagcaaaaggaaataatagaacaa
ggaattgacttattcaacaagaaaccaaagagggggattcagtacctgcaagaacaagga
atgcttggtactacccctgaagatattgctcaattcttgcatcaagaggaaagattagat
tcaactcaggttggggagttcctgggagacaacgataaatttaacaaagaagtcatgtat
gcatatgtagaccagcacgacttttcgggaaaggattttgtttcagcactgcgcatgttt
ctagaaggatttcgtctaccaggagaagctcaaaaaattgatcgcttaatggagaaattt
gctgctagatatttagaatgtaaccaagggcaaactctttttgctagtgcagatactgca
tatgttttagcttactcaattatcatgttgacaacagaccttcacagtccacaggttaag
aataaaatgacaaaagaacagtatattaaaatgaatagaggtatcaatgacagtaaagat
ctccctgaagaatatttgtctgctatctataatgaaatagctggaaagaagatttcaatg
aaagaaacaaaagaattaacaatacccacaaaatccagtaaacaaagtgttgccagtgag
aagcagagaagacttctgtataacttggaaatggaacaaatggctaaaacagctaaagct
cttatggaggcagtgagccacgttcaggccccttttactagtgcaacacacctggagcat
gtgagacccatgtttaagttggcatggacacctttcctggctgcattcagtgtgggtctg
caggactgtgatgacaccgaagttgcctctctttgtttggagggtatacgatgtgcaatc
cggattgcttgcattttcaacattcagcttgaaagagatgcctatgttcaagcattagca
agatttacgttgcttactgtgagttctggtattactgaaatgaagcagaagaatattgac
accattaaaactctcatcacggtggctcatacagacggaaactatttaggaaattcctgg
catgagattctgaaatgcatcagtcaacttgaactggcacagctaataggaactggagta
aaacctcgctacatctcagggacagtgcgtggcagggaaggttcttttactggaacaaaa
gatcaggcacctgatgagtttgtggggctgggactggttggtggaaacgtggattggaag
cagatagcaagtattcaggaatccattggtgaaactagctcccaaagtgttgttgttgct
gtagacagaatatttacaggatctacaaggttggatggaaatgctattgtggatttcgtt
cgctggctttgtgctgtgtctatggatgagctgctgtctgctacccaccctcgaatgttt
agtctgcagaagattgtagagatttcctattacaacatgggccggataaggttgcagtgg
tctaggatctgggaagttattggcgatcattttaataaggttggctgcaatcccaatgaa
gatgtagctatttttgcagtggactcattaaggcaattgtcaatgaaattcttggaaaaa
ggagaacttgctaatttccgattccagaaggacttcctaagaccatttgaacatatcatg
aagagaaacaggtctcctactattcgagacatggtcgtacggtgtattgcgcagatggtg
aattcccaggctgctaacattcgttctggctggaaaaacattttttcagtctttcatctg
gcagcctcagatcaggatgaaagtatagtggaactggcattccagactacaggacacatt
gtcacaatcgtgtttgaaaaacacttcccagcgaccatagattctttccaggatgcagtg
aagtgcttgtctgagtttgcctgcaatgcagcatttccagacaccagtatggaagcgatc
cgcctcattcgccactgtgcaaaatacgtgtctgacaggcctcaggcattcaaggaatat
acaagtgatgatatgaatgtagctcctgaagacagagtgtgggtgcgaggatggttccca
attctctttgagttgtcctgtatcatcaatagatgcaaattagatgtaagaaccaggggc
ttaacagtaatgtttgaaataatgaagacatacggccatacttacgaaaaacactggtgg
caagatttgtttcggattgtcttcaggatatttgacaacatgaaactgccagaacagcag
actgagaaagccgaatggatgactactacctgtaaccatgcactttatgcaatatgtgat
gtatttacacagtatttagaagtacttagtgatgttcttttggatgatatatttgcacag
ctgtactggtgtgtgcagcaagacaatgagcaactggcacgatctggtacaaactgtttg
gagaatgttgtcatccttaatggtgaaaagtttaccctagaaatctgggataaaacttgc
acttgcatgctggatattttcaaaactacaatccctcatgcgctgctgacttggcgacca
gctggtggggagttctgctctggctctccctctgatgcaaaagaaaaactggatacaatc
tcccagaagtcagtagacatccatgattccatccagcctcgctctgcagatggacgcccg
tatcagcccagcccaggggccacggtagcggaagaaacgagtaaagccaggccagcagca
aaattcccagaacagaagttatttgctgctcttttgatcaagtgtgttgtacagctggaa
ctcattcagacgatcgacaatattgtgttcttcccagcaactagcaaaaaagaggatgca
gagaatctagcagcagcacaaagagatgcagtagactttgatgtccatgtggatacacag
gatcaagggatgtatcgtttcctaacatcacagcagcttttcaaacttctcgattgtctg
ctggagtctcacagatttgctaaagcatttaattcaaacaatgaacaaagaactgctctc
tggaaagcaggtttcaaaggcaaatccaagcccaacctgctgaagcaggagacgagcagc
ctggcgtgtgggctgcgcatcctgttccgcatgtacatggacgagagccgcaccagcgcc
tgggaggaagtgcagcacaggctgctcaatgtctgcagcgaggctctgagctattttctc
acccttacatcagaaagtcatcgggaagcctggactaaccttttactcttatttttgact
aaagtcctgaagataagtgatgaaaggttcaaggcccatgcctcgttctactatcctttg
ttgtgtgaaatcatgcagtttgaccttattcctgagcttcgagctgttttgcgaaggttt
ttcctgcggattggtgtggttttccaaatatcccaaccaccagaacaagagtctggatta
agcaagcattag
DBGET
integrated database retrieval system
