Ficedula albicollis (collared flycatcher): 101819764
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Entry
101819764 CDS
T02815
Symbol
COL23A1
Name
(RefSeq) collagen type XXIII alpha 1 chain
KO
K24355
collagen type XXIII alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fab00536
]
101819764 (COL23A1)
Glycosaminoglycan binding proteins [BR:
fab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101819764 (COL23A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101819764
NCBI-ProteinID:
XP_016157016
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Position
13:7900101..7921551
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AA seq
414 aa
AA seq
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MVFPHLNHGFLANDQLVYSRRVLKGDQGRDGATGPPGPPGPPGARGPPGDTGKDGPRGPP
GPPGFKGEPGEDGVMGARGPPGPKGEPGVQGKKGDDGIPGEPGLVGPKGEKGSVGPRGEN
GTDGFPGLKGEPGEKGGIGSIGPRGPPGLKGEQGDTVVIDYDGRILDALKAAGIHKVLGP
PGPPGPPGPQGTPGSKGELGLPGPPGMDGEKGPKGAKGDQGSMGIMGQKGETGEMGSAGP
PGAEGPKGDKGEKGDTGSPCLQNNHIIPEPGPPGLPGPMGPPGIQGPKGLDGAKGEKGDS
GEKGDQGDTGPAGLPGAPGLIGLPGTKGEKGKPGEPGLDGFPGLRGEKGERSERGEKGER
GIPGRKGAKGQKGEPGPPGLDQPCPVSGTMDLSGALQESVKLPAWLLSMFEIRE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggtttttccccacctcaatcatggatttctggctaatgatcagcttgtctatagccgg
cgagtgctcaagggtgatcaaggtcgagatggagccacgggcccccctggtccgccagga
cccccaggtgcccgggggcctcctggtgacacgggaaaggatggcccacgaggacctcca
ggcccccctggtttcaaaggggagccgggagaggatggagtcatgggtgccagaggacct
ccaggaccaaagggtgaacctggtgtccaagggaaaaagggtgatgatgggatccctggg
gagccaggactcgtgggccctaagggagaaaaaggaagtgtgggtccaaggggagagaac
ggcacagatggcttcccaggactaaagggtgaacctggtgagaagggaggaattggctcc
attggaccccggggtccccctgggctgaaaggggagcagggagacacggtggtaatcgac
tacgacggccgaatcctggatgcgctcaaggctgcagggatacacaaagtgctgggtcca
ccaggtcccccaggaccaccaggcccccaaggcactccaggttccaagggagagctgggc
ttgccaggtccacctgggatggacggtgaaaagggtcccaaaggagcaaagggtgaccag
ggcagcatggggatcatggggcagaaaggagagacaggagaaatgggctcagcaggtccc
ccgggagcagaagggccaaaaggagacaaaggagaaaaaggagacactgggtcaccatgt
ctacagaataatcatatcatacctgagcctggaccccctggattacctggccctatgggt
cctccaggaatccaagggcctaaaggtttggatggtgcaaagggagaaaaaggtgacagt
ggtgagaagggggaccaaggtgacactggacctgctggtctcccgggtgctccagggctc
attggtttacctggtaccaaaggagaaaagggaaagccaggggagccaggattggatggt
ttccctggtctcagaggagagaaaggagagagaagtgaaagaggggagaagggtgaacga
ggaattccagggagaaaaggggccaaaggacagaagggggaaccaggccctcccggactg
gatcagccttgtcctgtgtcaggaacaatggacctcagtggagctcttcaggagagtgtg
aagctgccggcctggcttctgagcatgtttgaaatcagggagtaa
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