Ficedula albicollis (collared flycatcher): 101819886
Help
Entry
101819886 CDS
T02815
Symbol
UBR1
Name
(RefSeq) ubiquitin protein ligase E3 component n-recognin 1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101819886 (UBR1)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101819886 (UBR1)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
101819886 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
STAC2_u1
Motif
Other DBs
NCBI-GeneID:
101819886
NCBI-ProteinID:
XP_016154040
UniProt:
A0A803V0U1
LinkDB
All DBs
Position
5:complement(27224037..27274391)
Genome browser
AA seq
1704 aa
AA seq
DB search
MDPLVEKQEEMVQAAILYPLECYLFGEDPDVFLEKLQQSGTSQLCGKVFKGGETTYSCRD
CAVDPTCVLCIDCFQNSIHKNHRYKMHSSTGGGFCDCGDTEAWKAGPVCTKHAPGASSSP
KENSECQLNEEIMEHSRRVFPSVIKYIVDMLIWEEENELPVELTISREKADSYYCVLFND
EHHSYDHVIYSLQRALGCELGEAQLHTTAIDKEGRRAVKAGHYAACQEAKEEIKRHSENV
SQRPLHVEVLHADVMAHQKFALRLGSWLNKLMSYSSDFRQIFCQICLKEEAGSEKPCFIS
KLMLWDARLHKGARKVLHELIFSSFFMEMEYKKLFAVEFVKYYKALQKEYISDDHDRVLS
VTALSVQMFTVPTLARHLIEEQNVITTITETLLEVLPEYLDKNDKFNFQGYSQDKLNRVY
AVIYDLRYVLVSKPTVWTDRLRERFLEGFVSFLRILTCMQGMEEIKRQIGQHIEVDPDWD
AAIAIQMQLKNILLMFQEWCACDEELLLRSYRECHKAVMRCSSNGRSREKTVFHLCGHTL
ESKPYRVSADPVSIHLPLSRTLAGLHVRLSKTGAISRLHEFVSPEEFQVELLVEYPLRCL
VLVAQVAAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNQFLLLILQ
RYELADAFKKIKPTKDQDLIKQYNVLIEEMLQILIYVVGERYVPGISNVTKEDVIMREII
HLLCIEPMAHSAITKSLPENENNETGLENVIDKVATFKKPGVSGHGVYELKDECLKEFNM
FFYHYTKTQHSKAEHTQKKRRKQENRDEALPPPPPPDFSPAFSNVVRILNCDVMMHILRT
LLQRAVELETHLWTEAMVQMVLHLLSLGLLEEKQQLQKCPEEEVTFDFYHKATRMGSSAL
NAVNVLMLVEKLKRVPQLEAQKDTVNWILQMFDMVKRLREKSSLATVGAASGSEAAKGDE
TQSTQDKEKAERKRKAEAARLHRQKIMAQMSALQRNFIETHKLLYENTLESQGKGDAIME
EESISSAIDYSRIALGPKRGPSVIEKEILTCILCQEEQEVKLESAAMVLSACVQKSTALT
QNRSRILELSGDTLDPLFMHPDLPCGTHTGSCGHVMHAACWQKYFEAMQLNFRQRLHVEQ
IFDLENGEYLCPLCKSLCNTVIPIVPLQAQKINSEDAEAVAQILSLARWLEIVTARISGY
SVKNAKGEKQNLPPFTNKGTGNSALEFHSILSFGVQSSAKYSSSLKEMLILFATTIYRVG
LKVAPNEADSRIPMMTWSTCAFTIQCIENLLETEGKPLFGSLQNRQHSGLKALVQFAAAQ
RTTSPQVLIQKHLIRLLGVLLPNFKREDTPSLLEVDMFHILVGAVLSFPSLYWEDAVDLQ
PSSVSSAYNHLYLFHLTTLAHIMQIVISSATESPTAHSSDNGEEAQSAQSFCREVCQYTS
GCFSQDIPGWLVWDCVKKGIMPYLRCAALFFHYLLGVSPPEELLQVSEEGQFKALCSYLS
LPTNLFLLFHEYRDTVNPLLQRWCADPVVLSCLKGKSIAIRYPRKRNHLIELPEDYSCLL
NQASQFRCPRSSDDEQKHPVLCLFCGAMLCSQNTCCQELVNGEELGACTSHALQCGAGVC
MFLKIRECKVVLIEGKTRGCLYPAPYLDEYGETDPGLKRGNPLHLCQERYRKLHLLWQQH
CIIEEIARSQETNQIIFGFNWQLL
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggaccccttggtggagaaacaagaagaaatggtccaggcagcaatattataccccttg
gaatgttacttgtttggagaggacccagatgtattcctggagaaactacaacagagtgga
acctcccagctctgtggaaaggtgttcaaaggaggggagacaacatactcttgcagagac
tgtgcagttgatccaacttgtgtgctctgtattgactgcttccagaatagcattcacaag
aatcaccggtacaagatgcatagctccactggaggtggattctgtgactgtggggataca
gaggcatggaaggctggaccagtgtgtactaaacatgcgcctggagcatcaagttctcca
aaagaaaattctgaatgtcagttgaatgaagaaattatggagcattctaggagagtgttt
ccctctgtgataaaatacattgtagatatgcttatctgggaggaagagaatgaactgcct
gtggagctcaccattagcagagagaaggcagacagctactactgtgtccttttcaatgat
gaacaccattcttatgatcatgtcatctacagcctgcaaagggcacttggctgtgaactt
ggtgaagcccagttgcatacaactgccatagataaagagggtcgtagagctgttaaggca
ggacattatgctgcttgtcaggaagcaaaagaagaaattaagaggcattctgaaaacgtt
tctcaacgaccacttcatgtggaggtgctgcatgctgatgttatggcacaccagaagttt
gccttgcgccttggttcttggctgaacaaactcatgagctattcaagtgactttcgccag
atcttttgtcaaatatgtctcaaagaagaagctggatctgaaaagccctgctttataagc
aagttgatgctatgggatgcaagacttcataaaggggcaaggaaggttcttcatgaactt
atcttcagtagttttttcatggagatggaatacaaaaaactttttgctgtggaatttgtg
aagtattacaaggcattgcaaaaggagtacatcagcgatgatcatgacagagttctctct
gtgacggcactttcagttcagatgttcactgtacccactctggcccgacatcttattgaa
gagcaaaatgtaatcaccaccattacagagaccctcctagaagtgcttccggagtaccta
gacaaaaatgacaagttcaacttccagggctacagtcaggacaaactgaaccgggtctat
gcagtaatatatgacctcaggtatgtcttagtcagcaagcctacagtgtggacagaccgt
ctgagggagcgttttttagaaggatttgtttctttcctaaggattctaacttgcatgcag
ggaatggaggagataaaaagacagattggtcagcacatagaggtggaccctgactgggat
gcagctattgccatacagatgcagctcaagaacattcttttgatgttccaggagtggtgt
gcctgtgatgaagagctgctgctcaggtcttacagagaatgtcataaagctgtcatgagg
tgcagctcaaatggccgctctcgggagaagacagtatttcacttatgtggccataccctg
gagagcaaaccctacagagtgtctgcagatcctgtcagcatacatttgccactgtctagg
actcttgctggtcttcatgtacgattaagcaagactggagccatctcaagattgcatgag
tttgtttctcctgaagagtttcaagtggagctgctggtagaatatcctctgcggtgcctt
gtcctggttgcacaggttgcagcagagatgtggagaaggaatgggctctccctgattagc
caggtattctattatcaagatgttaaatgcagagaagagatgtatgataaagacatcatc
atgctccagataggtgcatctcttatggatccaaaccagtttctcctgctgatactgcag
agatatgagcttgctgatgctttcaaaaagatcaaacctaccaaagatcaggatttgatt
aagcaatataatgttttaatagaagagatgctacagatcctcatctatgttgtgggggaa
agatacgtgcctggaatcagtaatgtgacaaaagaagatgtaataatgagagaaatcatc
catctgttatgtattgaaccaatggctcacagtgcaattaccaagtccttgcctgaaaac
gagaacaatgaaactggcttggagaatgtaattgataaagtggctacgttcaagaaaccg
ggtgtgtctggccatggagtttatgaactgaaagatgaatgtctgaaggaattcaatatg
ttcttttatcactacactaagacccagcacagcaaggctgagcatacacaaaagaaaaga
agaaaacaagaaaacagggatgaagcattgccaccacctcctcctccagacttcagtcct
gcgttcagcaacgtggtgaggattctgaactgtgatgttatgatgcacatcctgcggacc
cttctgcagagggcagtggagctggaaacccacttgtggactgaggcaatggttcaaatg
gtgcttcatcttctttctttagggttactagaagagaagcagcagttacagaagtgtcct
gaagaagaagtaacctttgatttttatcacaaagcaacacgaatgggaagctcagccttg
aatgctgtgaatgtattaatgcttgtggagaaattgaagagagttcctcagttagaggca
cagaaggacacagtcaattggatactgcagatgtttgacatggtgaagagattgagagaa
aaatctagtttggcaacagtaggagctgcatcaggctcagaagctgcaaaaggggatgag
acacagagcactcaggataaagagaaagctgagcggaagagaaaggcggaagcagcgagg
ctgcaccgtcagaagataatggcccagatgtctgccttgcagaggaattttattgaaacc
cacaagctcctctatgaaaacacactggagtcccaggggaaaggtgatgctattatggaa
gaagaaagcatctcttcagcaattgattactccagaattgctttgggccccaaacgaggt
ccatctgtcattgagaaagagattttgacctgcattctttgtcaggaggaacaggaagta
aaattggaaagtgctgccatggtattatctgcctgtgtgcagaagtcaactgccttaact
cagaataggagcagaattcttgaactctcaggagatacactagatcctctcttcatgcac
cctgacttaccttgtgggacccacacagggagctgtggtcatgtaatgcatgcagcctgc
tggcagaagtactttgaagcaatgcagctgaacttccgacagcgtctgcatgttgaacag
atatttgacttggagaatggagagtacctttgtccactttgcaaatctctgtgcaatact
gtgatccctattgttccattgcaggctcaaaaaataaacagtgaggatgcagaggcagta
gctcaaatcctgtccctagctaggtggctggaaattgtcacagccaggatatcaggctac
agcgtgaaaaatgctaaaggagagaaacaaaatcttccacctttcaccaacaagggaaca
gggaactcggctttggaattccattccatccttagttttggagttcagtcctcagccaag
tactcgagcagtctcaaggagatgcttattctctttgccaccaccatttacagagttggg
ctcaaagttgctcctaatgaagctgattcccggattcctatgatgacctggagcacatgt
gcttttaccatccagtgtatagaaaacctcttggaaacagaggggaagcctttatttgga
tctctacaaaatagacagcacagtggccttaaagcattagtgcagtttgcagctgctcag
agaacaacatccccgcaggtcctgattcagaaacatctgattcgtctcctaggagttctc
ctaccaaactttaaaagagaggacactccatcactcttagaagtagatatgttccacatt
ttggtgggagctgtgttatcctttccatctttatactgggaagatgctgtagacttgcaa
ccttcatcagttagttcagcctataaccacctctacctcttccatctgacaacactggca
cacataatgcaaattgtcatctcttcagcaacagaatcccctactgctcactcatctgac
aacggtgaggaggcacagtctgcacagtctttctgtagagaggtttgccagtacactagt
ggttgtttcagtcaggatattccaggctggcttgtgtgggattgtgttaaaaaaggcatc
atgccttaccttcgttgtgctgctttattttttcattatttgctgggagtttctccacct
gaggaactactgcaagtttctgaagaagggcaattcaaggcactttgtagttacctctct
ctacctacaaatttgttcctgctcttccatgaatatcgggacacagtaaatccactgctt
caaaggtggtgtgctgatccagtggtgttaagttgtttgaaagggaaaagcattgcaata
aggtatcctaggaaaagaaatcacttaatagagcttcctgaagactacagttgccttctg
aaccaagcctctcagtttagatgcccacggtcttctgatgatgagcaaaagcacccagta
ttgtgtttattctgtggggcaatgttgtgttcccagaatacttgctgtcaggaactggtg
aatggggaggagctgggagcctgtacttctcatgctcttcaatgtggagctggagtctgc
atgtttcttaaaatcagggaatgcaaggttgtccttattgaaggtaaaaccaggggctgc
ttatatcctgcaccctacttggatgaatatggagaaacagatccaggtctaaaaagaggc
aatcccctgcacttgtgtcaagagcggtaccggaagctccatctgctgtggcagcagcac
tgtatcatagaggagattgccaggagccaagaaacaaatcagatcatcttcggattcaat
tggcaattgctctga
DBGET
integrated database retrieval system
