Ficedula albicollis (collared flycatcher): 101819888
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Entry
101819888 CDS
T02815
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101819888 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101819888 (ERCC6)
03400 DNA repair and recombination proteins [BR:
fab03400
]
101819888 (ERCC6)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101819888 (ERCC6)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
101819888 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
101819888
NCBI-ProteinID:
XP_005048417
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All DBs
Position
6:complement(18743385..18788624)
Genome browser
AA seq
1507 aa
AA seq
DB search
MRSFVCVDVLVIMCFFFVAFEQKMPTHKSLLPDSAQEQESATTSSNDCLHNDENSGTEQE
NGICDNGVGNSVGIPNSDCQASTSMAVPLEAPRRTHPLLQINRQQIQSVSCSAHAAELKD
LGVDVYDQDVLEQGVLQQVDNAINEANKAAKIANASKEYESVLEDLRSCTTSLRHINKII
EELSPQAADNKNVNRKLDSVKRQKYNKEQQLKKIKAKQKRLQGILGLTEFADEANEIEYE
EDEEPGPSSLGSMLMPAQETEWAELIRTGQMTPFGTKIPQKPERKARQLRLNEASDFEKY
LADQAKLSSERRKLSRHRGAKKKAQAKNVQCVAPAAATKEKSGKALSKTDKRLKKHLREL
QKHALQIHSKARIPKEKKYPEAKKFRHEQEDDSGESEYVPDEELFDPEAAEEEEQSSSLD
ENDSDYELKSLSRKRKHLVKKGFKEDENDADFVPSSEEEEHTPGKHKVRRWRDDGDVDYY
KQRLRKWQKERLKDKEHQTAEELSEESDVEFEEGFKVPGFLFKKLFKYQQTGVRWLWELH
CQQAGGILGDEMGLGKTIQIIAFLAGLSYSNMRTRGSNYRYQGLGPTVIVCPATVLHQWV
KEFHTWWPPFRVAVLHETGSYTKSKVKLIHEIASCHGILITSYSYIRLMQDNIHTYDWHY
VILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFIFPGKLGTLPV
FMEQFSVPITMGGYCNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQ
VLFCRLTEEQRQIYQNYINSKEVYQILNGDMQILLGLSTLRKICNHPDFVADSPRILKSV
PDAEVEDPNQFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMMQILEVFVRYRNYS
YLRMDGTTAVASRQPLVTKYNEDKSIFLFLLTTRVGGIGVNLVGADRVIIYDPDWNPSVD
TQARERAWRIGQKKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQNRFFKSNDL
YELFTLNSPDVSQGTETSAIFAGTGSDVQVPKPPDKRDIHIAENSSHKKIKSSNSYSTTH
MKDSSFKAIETNEETKGNLEAFNQNSYAKDNAQAATDTNSLNKSKEECLEDDDKCLSQSM
PCSAGSSENAERLTAVVAGEGHGAAPADARTDLSPTSDTTGSWEKQGAKTEDGQFDNNHS
KCISKTKHKVDMLSHDSHKDKSKKKHHKDAKFEGKRIPHLVKQKQFRRENSEEQDSKKND
DYVLQKLFKKSGVHSVMKHDAIMDASNADHVLEEAEASRVAQDALRALRLSRQQCLGAAS
GVPTWTGTSGLSGAPSGIKSRFGQKRNSMLLSSHSTCASPAKKHKDGDTIKKQNIKKCSS
SEHFNGKSGESSSSALDSSSLLARMRARNHLVLPQQTRSEGDENHQPAPAPVQGSTEYDE
LLVDLRNFLAFQARVDGEASTRELLQEFESKLPAEHSCVFRELLRNICTFHRSPSGEGVW
RLKPEFR
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgaggagctttgtatgtgtggatgttcttgtgataatgtgcttcttctttgttgccttt
gagcagaagatgccaacacacaagagtctcctgccagacagtgcccaagaacaagagtct
gccactacttcaagcaatgattgcctgcataatgatgagaactcgggaactgagcaggaa
aatggcatttgtgacaatggtgtgggtaatagtgttggaattcccaactctgactgccag
gcttccacttccatggctgttcctttggaggcacctagaagaacacatccccttttgcag
atcaacaggcagcagattcagtctgtctcatgtagtgcacatgctgccgagctcaaagat
ttaggagttgatgtctatgaccaggacgtgttggagcaaggagttcttcagcaagtagat
aatgcaattaacgaagcgaataaagcagcaaaaatagctaatgcatcaaaagagtatgag
tcagtactggaggatttaagatcatgtacaacatctctgaggcatataaataaaattatt
gaggaactttcacctcaagctgctgacaacaaaaatgttaacagaaaactagattctgta
aaacggcagaaatataacaaggagcaacagctgaagaagataaaagcaaaacaaaaacgt
cttcaaggaatacttggtttaacagagtttgctgatgaagcaaatgagattgaatatgag
gaagatgaagaacctggtccatcatcccttggcagtatgcttatgcctgctcaggaaaca
gagtgggcagagctcattcgaactggtcagatgactccatttggaacaaaaatacctcag
aagccagagaggaaggcacgacagttaagattaaatgaggcatctgattttgagaagtat
ttagcagaccaagctaagctgtcatctgaaagaaggaagttatcccgtcacagaggagca
aagaagaaagcacaggccaaaaatgttcagtgtgtggctcctgcagctgccacaaaggaa
aaaagtggtaaagccctctcaaagacagataagcgcttaaaaaaacacttgagagagctt
cagaagcacgcccttcagattcattcaaaggccaggattccaaaggagaagaaatatcct
gaggccaagaagttcagacatgaacaagaggatgatagtggggaatctgagtatgtacct
gatgaggagctctttgatccagaagcagcagaagaggaagaacagtcatcctctcttgat
gagaatgattctgattatgaacttaagagtttatcaagaaaaagaaaacatctggtgaag
aagggttttaaagaagatgaaaatgatgctgactttgttccaagctctgaggaagaagag
catacaccagggaagcacaaagtgagacgatggagagatgatggagatgtggactattat
aaacagagactaaggaagtggcaaaaagaacgtttgaaggacaaagaacatcaaacagct
gaagagctttctgaagaaagtgacgttgaatttgaagagggtttcaaagtaccaggattt
ctcttcaaaaagctttttaagtaccagcagacaggtgttaggtggctttgggaattgcac
tgccagcaggcaggaggaattctgggagatgagatgggattgggcaagaccattcagata
attgccttcttggcaggtctgagctacagcaatatgaggactcgtggttcaaattacagg
taccagggattgggtccaacagtgattgtttgtccggctactgtgttgcatcagtgggta
aaagaattccacacttggtggcctccatttagagttgctgtgctccatgaaactggttct
tatacaaagagtaaggtgaaactaattcatgaaatcgcttcatgccatggaattttaatt
acatcttactcatacattcgactgatgcaggacaacatccacacctatgattggcattat
gtcattctggatgagggtcacaaaatccgaaatccaaatgctgcagtcacacttgcatgc
aagcagttccgcacaccccatcgaatcatcttgtctggctcccctatgcaaaataaccta
aaggagctctggtccctctttgactttatattcccaggaaaattgggaacactgcctgtg
ttcatggagcagttttctgtcccgataaccatgggaggatattgcaatgcctctcctgtc
caggtaaaaactgcttacaaatgtgcctgcgtgttacgggataccataaacccctacttg
ctgcgaagaatgaaagctgatgtaaaaatgagcctttcacttccagataaaaatgaacag
gtcctcttttgccgtttgacagaggagcagcgtcaaatctatcaaaattacatcaactct
aaagaagtttaccagattctcaatggagacatgcagattctcttaggactatcaactttg
agaaagatttgcaatcaccctgacttcgttgctgatagtcccagaattttgaagagtgtg
cctgatgctgaagtggaggatccaaatcagtttggatattggaaacgttctggaaaaatg
atagtggtagaatccttgctgaaaatatggcacaagcaaggtcacagagtgctgtttttt
actcagtcaagacagatgatgcagatacttgaagtctttgtgagatacagaaactattcc
tacctcaggatggatggcaccacagcagtagcttccagacagcctcttgtaacaaaatac
aatgaggacaaatccatatttctttttcttctaacaactcgtgttggtggcattggagtt
aacttggtcggtgctgaccgggttattatttatgatcctgactggaatcccagtgtagat
acacaggctcgggagcgtgcttggagaataggccaaaagaaagaggtgactgtgtatagg
ctgctcactgcaggtactattgaggagaagatataccacagacaaatcttcaagcagttt
ttaacaaatagagtgctgaaagaccctaagcagaatcgcttcttcaaatccaatgacctt
tatgaactatttactctgaacagcccagatgtgtctcaagggacagaaacaagtgcaatt
tttgcaggtactggttcagatgttcaagtcccaaagccacctgataagcgtgatatccat
attgcagaaaacagctcacacaagaagatcaagtcctccaattcctattccaccacgcac
atgaaagattcttcttttaaagcaatagagacaaatgaggaaaccaagggaaatttggaa
gcctttaaccaaaatagctatgcaaaagataatgcacaagctgctactgatacaaattca
ctcaataaaagcaaggaggaatgcttggaagatgatgacaaatgcctgtcccagtcgatg
ccatgcagtgcagggtcttcagagaatgccgaacgcctgactgccgtggtggctggtgaa
ggacatggagcagctcctgcggatgccaggacagatcttagccctacttctgatacaact
ggctcttgggaaaagcagggtgctaaaactgaagatgggcaattcgataataatcattcc
aagtgtatctcaaaaacaaaacacaaggtggatatgctgtcacatgacagccacaaagat
aagtctaagaagaaacatcacaaagatgccaaatttgaaggaaagcgtattcctcatcta
gtgaaacaaaagcaattcagaagggagaacagtgaagagcaagactcaaagaaaaatgat
gactatgtcttgcagaaacttttcaaaaaatcaggggtacacagtgttatgaagcatgat
gccattatggacgcttccaacgcagatcatgtgctggaggaagcagaggcaagcagagtg
gcccaggatgccttgagagctctaagactctctcgtcagcagtgtttaggagctgcttct
ggtgtgccaacctggacaggcacgagtggtctttcaggtgcaccatcaggaataaagagc
cggtttggtcaaaaaagaaactccatgctgctttcttcacattccacttgtgcatcacct
gcaaagaagcacaaggatggagatacaataaagaaacaaaatataaagaagtgtagctcc
agtgagcacttcaatggaaaatctggagaatcgtcatccagtgctctggactcttcatct
ttattagctcgcatgagggcaaggaaccaccttgttttaccccagcagacaaggagtgag
ggtgatgagaaccatcagccagcccccgccccagtgcagggttcaacggagtacgacgag
ctgctggtggatctgcggaacttcctggcgttccaggcccgcgtggacggcgaggccagc
actcgggagctgctgcaggagttcgagtccaagctgcctgcagagcactcctgtgtcttc
agagagctgctgcgcaacatctgcaccttccatcgcagccccagcggggaaggggtctgg
aggctgaagccagagttccggtga
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integrated database retrieval system
