Ficedula albicollis (collared flycatcher): 101819943
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Entry
101819943 CDS
T02815
Symbol
FIP1L1
Name
(RefSeq) factor interacting with PAPOLA and CPSF1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101819943 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101819943 (FIP1L1)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101819943 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
101819943
NCBI-ProteinID:
XP_005045342
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Position
4:complement(44492373..>44532007)
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AA seq
598 aa
AA seq
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SLLRGWTGVQGRRRAQGPPRAKGSERKGRQLSQRAAGERRRHSRDENEAERPEEEKSSAP
PPPGSEEEAAENGVVKTKVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNL
NIKAGGRAYGSSGAKVKGLDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEILPVTSTTNKITAEDKAMEVRPSAEILGGRYHLLKVQQGR
TGNLEKELAVQSTKPDFTSPPALFKSGIPTNRRISGSIDVIGQTITISRVEGRRRANENS
NIQVLSERSNPEVDSFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITV
PPPGFPPPPGGPPPSLIPTIDSGHSSGYDGRPVRAFSYGSDDEVELKTNDLLKVRKASKA
DKQKGRSPQYFTFPHPAGSAPSWSSLLDTSKQWDYYARREKDRERERERSRDRDRDRDRD
RDRDRTRDRERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTSREKEDRHRDRRHREK
EETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
tccctgctgaggggatggacgggcgtccagggacgcaggagagcacagggaccaccgaga
gcaaagggcagcgagaggaagggacggcagctctcgcagcgcgccgcgggagagcggcgc
aggcacagccgcgatgaaaatgaagcagagagaccagaggaagaaaaatccagtgctcca
cccccacctggaagtgaagaggaagctgcagaaaatggcgttgtgaaaacgaaggtggca
gaggctgaggatgacagtgatagtgatagtgatgatgacgaagatgatgttcaagtcacc
ataggggatattaagacaggagctccacagtttagttatggagcagcacctgtgaatctc
aatattaaagcaggaggacgagcttatggatcttctggtgcaaaagtgaaaggactggat
ctagatgcaccagggagtattaatggtgtgccacttctggaagtggatttagattctttt
gaagataaaccttggagaaagccaggggctgatctttctgattattttaactatggcttc
aatgaagatacttggaaagcttactgtgaaaaacaaaagagaatacgaatgggtcttgaa
attttgccagttacctcaaccacaaataaaattacggctgaagacaaagctatggaagta
agaccaagtgcagagattctcggtggcagataccatcttttaaaggtacagcagggcaga
actggaaatttggagaaagagttggcagtgcagtcgaccaaacctgatttcacatctcct
cctgccttattcaaatcaggaattccaacaaacaggcggatatctggctcaatagatgtg
attggacagaccatcactatcagcagggtggaaggacgacggcgtgctaatgaaaacagc
aacatacaggttctttcagaacgctctaatcctgaagtagacagttttaccaagccacct
ccatttttccctccaggagctccacctactcaccttccaccacctcctttcctcccaccc
cctccaactgtcagtactgctccacctctgattcccccaccaggtataccaataacagtg
ccaccgccaggttttccaccaccacctggcggtcctccaccttctcttatacccacaata
gacagtggacattcttctggctatgatggtcgtcctgttcgtgcattttcatatggcagt
gatgatgaagtggagctcaaaacaaacgatttattgaaagttaggaaagctagcaaggca
gataagcagaaagggagaagtcctcagtacttcacctttccacaccctgcaggttctgca
ccctcatggtctagtcttctggacaccagcaaacagtgggattactatgcacgaagggag
aaggatagggaacgtgagagagagagatcccgagatcgggatcgcgaccgggaccgagac
agagatcgagaccgtaccagagacagggaaagggaccgagatcacagtccgtcttcaagt
gcattcaacagtgatgaagaacgctacagatacagagactatgcagagaggggctacgac
cgccataggacaagtagagagaaagaagacagacacagagacaggagacacagagagaaa
gaagagactcgacacaagtcatctcgaagtaacagcagacgtcgtcacgacagtgaagaa
ggggatagccacagaaggcacaaacacaagaagtccaaaagaagcaaagaaggaaaagaa
gccagtggcgaacctgctcctgaacaggaaaacactgaagctgcccctgtggaatag
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