Ficedula albicollis (collared flycatcher): 101819959
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Entry
101819959 CDS
T02815
Symbol
USP1
Name
(RefSeq) ubiquitin specific peptidase 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101819959 (USP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fab01002
]
101819959 (USP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101819959 (USP1)
03400 DNA repair and recombination proteins [BR:
fab03400
]
101819959 (USP1)
Enzymes [BR:
fab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101819959 (USP1)
Peptidases and inhibitors [BR:
fab01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101819959 (USP1)
Ubiquitin system [BR:
fab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101819959 (USP1)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
101819959 (USP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
101819959
NCBI-ProteinID:
XP_005050679
UniProt:
U3KDE3
LinkDB
All DBs
Position
8:29503239..29514753
Genome browser
AA seq
781 aa
AA seq
DB search
MPGVLPGDSARASPSKKNRLSLKLFQKKEAKRVLDFIEAQENEPKGAEFRGAEIDQVVPA
AQPPSLVSCEKKDNMLPFVGLNNLGNTCYLNSVLQVLYFCPGFKTGVKHLYNIISKKRES
SKDEGEQKAEKGSCKEDPLASYELICSLHSLILSVEQLQASFLLNPEKYTDELATQPRRL
LNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEELNKLPVEEPAAKLEEKANQ
TSESNGSVSPAEEEDPTLGSHGGDAAKEKLLKGNGKRKSDAEGGNAKKKSKVSKEQIAAE
EHQRQTRSKRKATGEKMENQTDAIAKCSGESESAKPTQKKSRLRLNWLKSSCKQPSILSK
FYSLGKLTTNLGSKDPGKEYDCEFEESAVKCENGDSKEEYHEPASPVESHHGKGTEKEPK
KEGTELAVFELVERLFQGQLVLRTRCLECECFTERREDFQDISVPVQEDELSKSEESSEI
SPEPKTEMKTLKWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKC
FAASGLEFDCYGGLSKINTPLLTPLRLSLEEWSTRPTNDTYGLFAVVMHSGITISSGHYT
ASVKVTDLQSLELDRGNFLPEPGYAALKPEPLTEEEARAVAEDYDDGEVSFRLNGAAPPG
KVLGKKSTEAVGLLGGQKSKADCELCASKQPNPEKLLSAAPEPRGAQPGPQQGEPPALAA
AGLENKALYVLQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPTSSSTSTPYLLFYKKIV
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgtcctgcccggcgacagcgccagggccagcccctccaagaagaacaggctg
tcgctgaagctctttcagaagaaggaggcgaagcgagtgctggatttcatcgaggcgcag
gaaaatgagccgaagggcgcggagttccgaggcgccgagattgaccaggtggtacctgca
gcacagcccccctcccttgtcagctgtgagaaaaaagacaacatgttgccttttgtgggc
ttgaacaacctgggcaacacctgctacctgaacagtgtcctgcaggtattatatttttgt
cctggttttaaaactggagtaaaacatttatataacatcatttcaaagaagagagaatct
tcaaaggatgaaggagagcaaaaggcagaaaagggaagctgtaaagaagatcccttggca
agttacgaactcatctgcagtttgcactccttgatcctttcagttgagcagcttcaagcc
agttttctcctaaacccagagaaatacacggatgagttggccactcagccccggaggctg
ctgaacaccctcagagagctgaaccccatgtacgaagggtacctgcagcacgacgcccag
gaggtcctgcagtgtatcctgggcaacatccaggaaacctgccagctgctgaagaaggaa
gagctgaacaaactgcctgtggaagagcctgcagctaaactggaggaaaaagccaaccaa
acctctgagagcaatggatctgtcagccctgctgaggaggaggatcccaccctgggcagc
cacggcggagacgcggccaaggagaagctgctcaagggaaacgggaaaaggaaaagcgac
gccgagggcggcaacgccaagaaaaaatccaaagtatcaaaagagcaaattgcagcagaa
gaacatcaaagacaaaccaggtccaagaggaaagccacgggagaaaagatggaaaaccaa
acggatgccattgccaagtgctccggggagagcgagagcgccaagcccacgcagaagaag
tcgcgccttaggttaaactggttaaaatcttcctgcaaacagcccagtatcctgtccaaa
ttttacagtctaggaaagttaactacaaacttgggatccaaagaccctgggaaagaatat
gactgtgagtttgaagagtcagctgtcaagtgcgaaaatggtgacagtaaagaagaatat
catgaaccggcgtctcccgtggaaagccatcatggaaaaggaactgaaaaagaaccaaaa
aaggaaggtacagagctggctgtcttcgagctggtggagagactcttccagggccagcta
gtgctgaggacgaggtgcttggagtgcgagtgcttcacggaaaggagggaagatttccag
gacatcagtgtcccagtgcaagaagatgaactttctaaaagtgaagagagttctgaaatt
tctccagagccaaaaacagaaatgaagactctgaaatgggcaatttcccagtttgcctca
gtggagaggattgtgggagaggacaagtatttctgtgagaactgccaccactacacggaa
gccgagcgcagccttttgttcgataaaatgcctgaagtgatcacaattcacttgaagtgc
tttgctgccagtggcttggagttcgactgctacgggggcctgtccaagatcaacacgccg
ctgctgaccccgctgcggctgtccctggaggagtggagcacccggcccaccaacgacacc
tacgggctcttcgccgtggtcatgcacagcggcatcaccatcagcagcggccactacacg
gcctcggtgaaggtgacagacctgcagagcctggagctggacaggggcaacttcctgccc
gagccgggctacgccgcgctcaagccggagccgctgaccgaggaggaggcgcgcgccgtg
gccgaggactacgacgacggcgaggtctccttcaggctcaacggcgccgcgccgccgggc
aaggtgctcggcaagaagagcacggaggccgtggggctgctgggggggcagaagagcaag
gctgactgtgagctgtgtgccagcaaacagcccaaccccgagaagctgctgagcgcggcg
cccgagccccgcggcgcccagcccggcccccagcagggcgagcccccggcgctggcggcc
gccggactggagaacaaagctctctacgtgctccagagcctcaaggagtacgagggcaag
tggctgctcttcgatgactccgaggtgaaggtcacagaggaaaaggactttctgaattct
ctctctccgacatcgtcatcgacatcgactccgtacctactgttttataagaaaattgta
gagtga
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