Ficedula albicollis (collared flycatcher): 101819973
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Entry
101819973 CDS
T02815
Symbol
ARHGEF16
Name
(RefSeq) Rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101819973 (ARHGEF16)
Membrane trafficking [BR:
fab04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101819973 (ARHGEF16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_9
SH3_1
SH3_2
SOS1_NGEF_PH
PH
RHG20_PH
ECT2_PH
SH3_16
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
101819973
NCBI-ProteinID:
XP_005057678
LinkDB
All DBs
Position
21:complement(4377685..4392798)
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AA seq
697 aa
AA seq
DB search
MSRSRSGSSVDDKTLLLEYRCHPARPEPPSPTCVPGKRSSTPAPSATPLSPLASPTSAEP
RRIILSTESPAALKVGTQQLIPKSLAVSSKPKSSPSRPQSFGASREPLSPEPKLAAVPVL
DPEAEDEDEDDGGGALKRSLRNMSYRAAMKGLGAELEPAKAAASLKPVSEDGSALPNRSP
GRSKRTLGRKRVQKRGGSFKDQPRLYQEIRERGLNSVSHESDEDLLEESLPEEPSPLGTA
IVVQSYRPAQVTWSQLPEVLESGILQRISAEERKRQEAMFEIITSEYSYMHSLSILVGHF
MRSEELKETMTQTEHHHLFSNIGDILTVSTSFFEDLEKRHQEHLLIPDISDIVEEHASKH
FNPYISYCSNEVYQQRTLDKLLTTNPLFKETLKQIERKPECGGLPMISFLILPMQRVTRL
PLLLDTVQQKTNAHTAAYGAATRAVKAISKLVKSCNDGARAMERTEQMYTLQKQLEFGKK
KPFPLVSVSRWLLKRGELQLLLSEEAGLFRRGAGRLCHLFLFNDVLIITKKKSEESYTVM
NYATLDQVTVEKVESSDPPSPPPGKAGGHLLRVVLERDSEGRREEVLLSAETLSDRARWM
AALMHREKEKPDTTPKGDLSQVEVTRAYLAKEADELSLQQADVVLVLGEEDGWCWGERLR
DGERGWFPQACARPITSRVAAEGNVRRMERLRIETDV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggagccgctctggcagctcagtggatgacaagaccctgctcctggagtaccga
tgtcacccagcacggccggagccccccagcccgacctgtgtccctgggaagcgcagctcc
accccggctcccagtgccaccccgctgtccccactggcctcccccacctcggccgagccc
cgccgcatcatcctcagcaccgagagcccggccgcgctcaaggtggggacgcagcagctc
atccccaaaagcttggccgtctcctccaagcccaagagcagcccctcccggccccagagc
ttcggggcgagccgggagcccctgagccccgagccgaagctggcggccgtccccgtgctg
gacccggaggcggaggatgaggatgaggatgatggcggcggggccctcaagcgcagcctg
aggaacatgtcctaccgcgccgccatgaaggggctgggcgccgagctggagccagccaag
gccgcggcctcgctgaagcccgtgtctgaggacggcagcgccctgcccaaccgcagccct
ggcaggagcaagagaaccctcgggcggaagcgggtgcagaagcgtggtggctcgttcaag
gaccagcctcggctgtatcaggagatccgtgagagaggtctgaactctgtcagccatgag
tcagacgaggacttgctggaggagtccctgccagaggagccgtcccctctgggcactgcc
atcgtggtgcagagctaccgcccggcccaggtgacctggagccagctcccagaggttctg
gaatcaggcatcctgcagaggatctcggccgaagagcgcaagaggcaggaggcaatgttt
gagatcatcacttcagagtactcctacatgcacagcctgagcatcctggtgggacatttc
atgaggtcagaggagctgaaggagaccatgactcagacagagcaccaccacctcttctcc
aacattggggacatcctgacagtcagcacaagcttcttcgaagacttggagaagcgacac
caggagcacctcctgatccctgacatcagtgacatcgtggaggagcacgcctcgaagcac
ttcaacccctacatcagctactgctccaatgaagtctatcagcagaggacactggataag
ctgctaaccacaaaccccttatttaaagagaccctgaaacaaattgaaaggaaaccagag
tgtggaggcctgccaatgatctcatttctcattctgcccatgcagagggtaacacggctt
cctctgctcttagataccgtccagcaaaaaacaaacgcacacactgcagcatatggagct
gccacccgcgctgtgaaggccatcagcaagctggtcaagagctgcaatgatggagctcgg
gctatggagaggacggagcagatgtacaccttgcagaaacagctggaattcgggaagaag
aagcctttccctctggtgtcggtgtcgaggtggctgctgaagcggggggagctgcagctg
ctgctctcggaggaggccgggctcttccgccgcggcgccggccgcctctgccacctcttc
ctcttcaacgacgtcctcatcatcaccaagaagaagagtgaggagagttacacggtcatg
aactatgccacgctggaccaggtcactgtggagaaggtggagagctcagatccaccctcc
cctcctcctggcaaggctggtgggcacctgctgcgggtggtgctggagagggacagcgag
ggccggcgggaagaggtgctgctgtcagcagagacgctgagtgaccgggcccggtggatg
gcggcgctgatgcacagggagaaggaaaagcctgacaccactcccaaaggagacctgagc
caggtggaggtgacccgtgcctacctggccaaggaggcagatgagctgtccctgcagcag
gcagacgttgtgctggtgctgggggaagaggacggctggtgctggggggagcgtctgcgg
gacggggagcggggctggttcccccaggcctgtgcccggcccatcaccagccgcgtggcc
gccgagggcaacgtgcggcgcatggagcggctgcgcatcgagaccgacgtgtag
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