Ficedula albicollis (collared flycatcher): 101820162
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Entry
101820162 CDS
T02815
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid type A receptor alpha1 subunit
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04080
Neuroactive ligand-receptor interaction
fab04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101820162 (GABRA1)
04082 Neuroactive ligand signaling
101820162 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fab04040
]
101820162 (GABRA1)
Ion channels [BR:
fab04040
]
Ligand-gated channels
GABA-A
101820162 (GABRA1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
101820162
NCBI-ProteinID:
XP_005053955
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Position
13:complement(15337121..15375511)
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AA seq
482 aa
AA seq
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MSGFFPLRPVLMWGMLMVIFLLVPESIMKRFLVLCDCLWAWSLLLNALTERSYGQTSSQD
ELKDNTTVFTRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFF
RQSWKDERLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGT
LLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGS
RLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFW
LNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFAT
VNYFTKRGYAWDGKSVVPEKPKKVKDPLIKKNNTYTAAATSYTPNIARDPGLATIAKSAT
IEPKEVKPETKPAEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKVQTP
HQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtttttttcccctaagacctgttttaatgtgggggatgttaatggttattttc
cttctagttccagagtccatcatgaagagattcctggtgctttgtgactgcctctgggcc
tggagcctcctcctgaatgcactcactgaaagaagctatggacaaacctcatcacaagat
gagctcaaagacaacaccacagtgttcaccagaatattggatcgtcttctggatggttat
gacaaccgcctgagaccagggctgggagagcgtgtaactgaagtgaagactgacatcttc
gtcaccagttttgggcctgtttcagaccatgatatggagtacactatagatgtatttttc
cgccaaagctggaaagatgagagattaaaattcaaaggaccaatgactgttctccgattg
aataatttaatggccagcaaaatttggacacctgatacctttttccataatggaaagaag
tcagtggctcataacatgacaatgccaaataaactattacgaattacagaggatgggacg
ttgctatatacaatgagattgactgtgagagcagaatgtccaatgcatttagaagacttt
cctatggatgcacatgcttgccccttgaaatttggaagctatgcttacaccagagcagag
gttgtgtacgagtggacacgggaaccagcaaggtcagtggttgtggctgaagatggctct
cgactgaaccagtacgatctgcttgggcaaactgtggactctggaattgtgcagtccagt
acaggggaatatgttgttatgactacacattttcatttgaagaggaagattggttacttt
gtcatccagacttacctgccatgcatcatgacagtgatactgtcacaggtgtccttctgg
cttaacagagaatctgttccagcaagaactgtatttggagtgacaaccgtgctgaccatg
accacgctgagcatcagcgccaggaactcgctgcccaaggtggcctatgccacggccatg
gactggttcatcgccgtctgctacgccttcgtcttctccgcgctcatcgagttcgccacc
gtcaactacttcaccaagagaggctacgcctgggatggcaagagtgtcgttccagaaaag
ccaaagaaagtgaaggatcctctcatcaagaaaaacaacacatacacagctgcagctacg
agctacacccctaatattgcaagggaccctgggctggcaaccattgctaaaagtgcaaca
attgagcccaaagaagttaagccagaaacaaaacctgcagaacccaagaaaacttttaac
agcgtcagtaaaattgatcggttatcaagaatagccttcccattgctttttggaatcttt
aacttagtctattgggccacctacctaaacagggagccccagctaaaagttcaaactcca
catcaataa
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