Ficedula albicollis (collared flycatcher): 101820202
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Entry
101820202 CDS
T02815
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101820202 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101820202 (SMARCC1)
03036 Chromosome and associated proteins [BR:
fab03036
]
101820202 (SMARCC1)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101820202 (SMARCC1)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101820202 (SMARCC1)
PBAF complex
101820202 (SMARCC1)
GBAF(ncBAF) complex
101820202 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
BRCT
SpeFL
Motif
Other DBs
NCBI-GeneID:
101820202
NCBI-ProteinID:
XP_016151701
LinkDB
All DBs
Position
2:complement(461209..534193)
Genome browser
AA seq
971 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMTIEKTLVQNNCLSRPT
IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADPPPPPPPPPPPPPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSEASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTFGLESSCIAGTGPEEP
DRMDGAEEEKMETEVEGQPAEKVESKAESESEEGEKVPEGESERGVEKEPEGEGAAEPKA
EEKEAEENKENVDGSKDKEAEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA
ELRARQQMEQQHSQTPQQPQQHPSGPGITPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHP
PQPGQMPGPGSIMPGQPMPGRMMSVPMAGNLLGPRVPLAAPNGMYPGPAPAPPAEGVTPP
PAGAPPASAAP
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggaggaggtttgacctgcagaatccctcccggatggatcggaacgtg
gagatgttcatgaccattgagaaaaccctggtgcagaacaactgtctgagcagaccaacc
atctacctcattcctgacatggagctgaagctggccaacaagctgaaggacattgtcaaa
cgtcaccagggaacagtcactgaagagaaatccaaggctacccaccatgtgtatccaagt
cctacctcaatggatgatgatgagtggttgagacctgtgatgaaaaaggacaagcaggtg
ctggtgcattggggcttttttccagacagctatgacacctgggtccatgccaacgagatt
gatgcagaaattgaggatccccccattcctgagaagccctggaaggttcatgccaagtgg
attctggacactgatgtgttcaatgagtggatgaatgaagaggattacgaggtggatgag
aacaggaaatccgtgagttttcgccagaggatctccatgaagaatgaggagcccgtgcgg
agccccgagaggagggacaggaaagcagcagccagcacaaggaagaggaaacattcccct
tccccaccccccacccctgtggagtccaggaaaaagactgggaagaaaggccaagcagct
ctctatgggaaaaggagggggcagaaggaggaggatgaacaggaggatctcaccaaggac
atggaggatcccaccccagtacccaacatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaggacagtgagaacacgcccgtcaaaggaggaaccgtggcagacctggatgag
caggatgaggagacagtggcaactggaggaaaggaggacgaggaccccaacaagggtgac
cagagccgctccattgacccgggggaggacaatgtcaccgagcagaccaaccacatcatc
atccccagctacgcctcctggttcgactacaactgtatccacgtgatcgagcgtcgtgca
cttccagagttcttcaacgggaaaaacaaatccaagactccagaaatatacctggcctac
aggaacttcatgatcgacacgtaccggctgaacccgcaggagtacctgaccagcacggcc
tgcaggaggaacctcaccggggacgtctgtgctgtcatgagggtccacgccttcctggag
cagtgggggctcatcaactaccaggtggatcctgagagccgccccatggccatggggccc
cccccgaccccccacttcaacgtgctggccgacccccccccccccccccccccccccccc
cccccccccccccaggttccagctgcccagcagatgctgagcttccctgagaagaacaag
gagaagccaactgacctgcagaacttcggccttcgcacagacatctactccaaaaagact
ttggccaagagtaaaggtgcaagtgctggcagagaatggacagagcaggagacactgctg
ctgttggaggcgctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggc
agccgcacgcaggacgagtgcatcctgcacttcctgcgcctgcccatcgaggacccctac
ctggagaactcggaggcctccctgggccccctggcctaccagcccgtgcccttcagccag
tcgggcaaccccgtcatgagcaccgtggccttcctggcctccgtggtggatccgcgcgtg
gcctcggccgccgccaaggctgcgctggaggagttttcccgggtcagggaggaggtgccc
ctggagctggtggaagcccacgtgaagaaggtgcaggaggcagccagagcctcggggaag
gtggatccgaccttcgggctggagagcagctgcatcgcaggcacgggccctgaggagcct
gacaggatggatggagctgaggaggagaagatggagacagaggtagaggggcagccagca
gagaaggtggagagcaaagccgagagtgaatcggaggagggcgagaaggtcccggaaggg
gagagcgagcgcggcgtggagaaggagccagagggggaaggggctgcagagcccaaggca
gaggagaaggaggcagaggagaacaaggagaacgtggatggcagcaaggacaaggaggct
gaggctggcaagaagaaagtggaacatgagatctcagagggaaacgtggccacagctgca
gctgctgccttggcctctgctgccaccaaggccaagcacctggcagctgtggaggagagg
aagatcaagtccctggtggcccttctggtggagactcagatgaagaagctggagataaaa
cttcgccactttgaggagctggaaaccatcatggacagggagaaggaggcactggagcag
cagaggcagcagctgctgacagagaggcagaacttccacatggagcagctgaaatacgcc
gagctcagggctcgccagcaaatggagcagcagcacagccagaccccccagcagccccag
cagcaccccagcgggcctggcatcacccccctgggggctccagctcacccggggctgctg
ccccaccagcagccccctccctaccccatgatgcaccaccagatgccacctcctcaccca
cctcagccaggtcagatgccagggcctggctccataatgccaggacagcccatgccaggc
aggatgatgtctgttcccatggccgggaacctgctggggccacgtgtgccactggcagcg
cccaacgggatgtaccccggcccggcgccggcgccgcccgcagaaggagtgacccccccc
ccggcgggggccccgcccgcctccgccgctccctga
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integrated database retrieval system
