Ficedula albicollis (collared flycatcher): 101820302
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Entry
101820302 CDS
T02815
Symbol
HNF1B
Name
(RefSeq) HNF1 homeobox B
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101820302 (HNF1B)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101820302 (HNF1B)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
101820302
NCBI-ProteinID:
XP_016158559
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Position
19:complement(10574055..10597755)
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AA seq
556 aa
AA seq
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MVSQLSALQRELLGALLSSGATKEGLIRALEDMVPAAGFGVKLESLPLSPGGAPDGRAAL
PALANGHGKGKLSGDEGSEDGDDFDTPQILRELQSLNTEEAVEQRAEVERMISEDPWRAA
KMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQ
FNQTVQGCGNVTDKGSQDQLLFLFPEFNQQNQGAAQLDDACSETPSKKMRRNRFKWGPAS
QQILYQAYERQKNPSKEERETLVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFAN
RRKEEAFRQKLAMDAYTGQPPHSMNLLLSHGSPHHNQPSASPPSKMPGVRYSQASGEAVS
SGAISHHGSAAMVTTSQAVLQQVSPAGLDPGHGLLSPEGKMQISVSGGGLPPVSTLTNIH
SLSHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAALQPVQFSQQLHS
PHQQPLMQQSPGHMAQQPFMATVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSSIS
TLTNMSSSKQCPLQAW
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccagctgagcgccctgcaacgggagctgctgggcgccctgctcagctccggg
gccaccaaggaagggctgatccgcgccctggaggacatggtgcccgccgccgggttcggc
gtcaagctggagagcctcccgctgtctcccggcggggcccccgacggcagggccgcgctc
ccggcgctggccaacgggcacggcaagggcaagctctcgggcgacgagggctccgaggac
ggcgacgactttgacacgccgcagatcctccgcgagctgcagtcgctcaacacggaggag
gccgtggagcagcgggcagaggtggagaggatgatcagcgaggacccgtggcgggcggcg
aagatgatcaagggctacatgcagcagcacaacatcccacagagggaggtggtggatgtc
accggcctcaaccagtcccacctctcccagcacctcaacaagggcacccccatgaagacc
cagaagagagctgccctgtacacgtggtacgtccgcaagcagcgggagatcctccggcag
ttcaaccagacagtccagggttgtggaaatgtgacagacaaaggcagtcaggatcagctg
ctgtttctctttccagagttcaatcagcagaaccagggggctgcccagctcgacgacgcc
tgctctgaaacgcccagcaagaagatgcggcgcaatcggttcaagtgggggccggcctcc
cagcaaatcttgtaccaagcctacgagcgccagaagaaccccagcaaggaggagcgtgag
actctggtggaggagtgcaacagggccgagtgtctgcagcgaggagtgtccccctccaag
gcacacgggctgggctccaacctggtcaccgaggtgcgtgtgtacaactggtttgccaac
cggcgcaaggaggaggctttccgccagaaactggccatggatgcctacacaggccagccc
ccacacagcatgaacctgctgctgtcccacggctccccacaccacaaccagcccagcgcc
tccccgcccagcaaaatgccaggggtccggtacagccaggccagcggcgaggccgtgtcc
tcgggggccatcagccaccacggcagcgctgccatggtcaccaccagccaggctgtcctg
cagcaggtctccccggccggcctggacccgggccacggtttgctctctcccgaaggtaaa
atgcagatctccgtgtcagggggtgggctgccccccgtgagcaccctgaccaacatccac
agcctgtcccaccacaacccacagcagtcccagaacctcatcatgacgccgctctcgggg
gtcatggccatcgcccagagtctgaacacctctcaggctcagagtgtccctgtcatcaac
agtgtggctggcagcctggcagccctgcagcccgtgcagttctcccagcagctgcacagc
ccccaccagcagccgctgatgcagcagtcccccgggcacatggcacagcagcccttcatg
gccaccgtgacccagctgcagaactcacacatgtatgcacacaaacaggagcctccccag
tattcccacacctcgcgcttcccctcggccatggtggtgacggacaccagcagcatcagc
acgctcaccaacatgtcctccagcaagcagtgtcccctacaagcctggtga
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