Ficedula albicollis (collared flycatcher): 101820336
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Entry
101820336 CDS
T02815
Symbol
PRDM1
Name
(RefSeq) PR/SET domain 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101820336 (PRDM1)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101820336 (PRDM1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
101820336
NCBI-ProteinID:
XP_005043984
UniProt:
U3KAS5
LinkDB
All DBs
Position
3:complement(71558862..71665600)
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AA seq
813 aa
AA seq
DB search
MKAATQCSSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVNDHPLDPSAD
GGTLTQAEASLPRNLTFKYSSNCKEVTGVISKEYIPKGTRFGPLVGEIYTSDTVPKNANR
KYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPA
NQELLVWYCRDFAERLHYPPSRELTMMNLTQTHINPKQHSADKDELYQKSVPKKEHSVKE
ILKMESNPPKGKDFFQTNISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRPHIPEDYLKA
SLAYGMDRPGYITHSPIQASTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHRE
PYSYLNGSYGSEGLGSYPGYAPPGHLSPAFLPSYNPHYPKFLLPPFNMSCNNLSALNNIN
GINNFNLFPRMYPLYGNLLSGGSLSHHMLNPTTLPSSLPSEGGRRLLQPDHPRDFLIPAP
NSAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGGEEAMNLIKS
KRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGF
TQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFV
HLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDLNRINEEIEK
FDISDNADKLEEVEDNIDLTSIVEKDILTMLRREMEGANLKVSLQRNLGNGLISSGCNLY
ESSDMSVMKLPHGHPLPLLPVKVKQETIEPMDP
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgctacacagtgtagctcggacgctgtgagtttcaagaatctggtgaaaggg
agagagtggacaatgaaaatggacatggaggatgctgacatgactctgtggacagaggct
gattttgaagagaagtgcacatatattgtaaatgatcacccgctggatcccagtgccgat
ggaggcaccctaactcaggcagaggcttccttgccaaggaacttgactttcaaatactca
tctaactgcaaagaggtcactggagttataagcaaagagtacatcccgaaaggaacacgc
tttggacccctggtaggagagatctataccagtgatacggttcccaagaatgcaaacaga
aaatacttttggcggatctattcaagtggtgaacttcaccacttcattgatggatttaac
gaggacaagagcaactggatgcgttatgtaaaccctggctactctgttcaggagcagaac
ttggctgcttgtcagaatggaatgaacatctacttctataccatcaagcccatccctgcc
aaccaagagctgcttgtgtggtactgccgagactttgcagagaggctgcactatcccccc
tccagagagctgacaatgatgaacctcacacaaacccacattaatccaaagcagcacagc
gctgataaagatgagctttatcagaaaagcgtcccaaagaaggagcacagtgtgaaagaa
atcctgaaaatggaatccaatcctcctaaaggaaaagacttctttcagaccaacatttca
ccagttactccagaaaaagacttggatgatttacgtaagaactatagcccggagaggtgt
ttcttccctcgagttgtctacccgatccgacctcacattccagaagactatctgaaagct
tccttagcatatggcatggacagacccggctacattactcactcgcccatccaggcatct
actacaccaagtccttctgggaggagcagcccagaccaaagtttaaaaagttcaagccct
cacagtagtccaggggtcacagtttcacctctggcacctacttcccaagagcacagagag
ccatactcttacttgaacggatcatatggctcagaaggattggggtcttatcctggatat
gcaccccctggccacctctcacctgcctttctgccgtcctataacccccattaccccaaa
tttctgttacctccattcaacatgagctgtaataacctgagcgctttgaacaatatcaat
ggcatcaacaatttcaatctcttcccgaggatgtaccctctttatggcaaccttctcagt
ggaggtagcctttcccaccacatgctcaaccccaccacgctccccagctcattgcccagc
gaaggaggccgtcgactgctgcagcctgatcatccgagagacttcctcataccagcaccc
aacagtgccttctcgatcacgggcgctgctgccagcatgaaggacaagccatgcagccct
accagtgggtcccccaccgctggtacagcagccagttcggaacacataatgcaacctaaa
cctacctcagtggtgttggctgccaccggcggtgaagaagccatgaatctcattaaaagt
aagaggaatgtgaccggttacaaaaccctcccgtacccactgaaaaagcagaatgggaag
atcaagtacgaatgcaacgtttgctccaagacctttggccagctctccaatctgaaggtg
cacctccgagtacacagcggagagagaccatttaaatgccagacttgcaataagggcttc
acgcagctggctcacctccagaagcactatctggtacacacgggagaaaagccccacgag
tgtcaggtttgtcacaagcggttcagcagcaccagcaatctcaaaacccacctgcggctc
cactctggagagaagccttaccagtgcaagctctgcccagccaaattcacccagtttgtg
cacctgaagctgcacaagcgtctccacacccgggaacgcccccataaatgcatccactgc
cacaagagctacattcacctctgcagcctccaggtccacctgaagggcaactgccccgtc
gccccggcctccggcctctccatggaggacctgaaccggatcaacgaggagatcgagaag
ttcgacatcagcgacaatgctgacaagctggaagaagtggaggacaatatcgacttgaca
tccatcgtggagaaggatatactgaccatgctcaggagggaaatggaaggagctaacctg
aaagtctctctacagaggaacctgggaaatgggcttatctcctcaggatgcaacctttat
gagtcgtcagatatgtcagttatgaagttgcctcacggtcacccactacctctgttacct
gtaaaggtcaagcaagaaacaattgaaccaatggacccttaa
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