Ficedula albicollis (collared flycatcher): 101820482
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Entry
101820482 CDS
T02815
Symbol
DTX4
Name
(RefSeq) deltex E3 ubiquitin ligase 4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101820482 (DTX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101820482 (DTX4)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101820482 (DTX4)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101820482 (DTX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_2
zf-RING_11
zf-ANAPC11
zf-C3HC4_2
zf-RING_5
zf-UDP
zf-RING_Vps41
zf-RING_16
ZNF512_C2HC
zf-C3HC4_4
zf_RING_Vps8_fungal
PHD
Motif
Other DBs
NCBI-GeneID:
101820482
NCBI-ProteinID:
XP_016154367
LinkDB
All DBs
Position
5:9432261..9436731
Genome browser
AA seq
427 aa
AA seq
DB search
MDVGITIQRAYEKQHPWVDLSAIGFCYVIDFATMGQINRQTQRKRRVRRRLDMVYPLVSG
TLPKSQSWPASPGAAAGAGASSSPPGVGGGKGSRPGLGTLNRSHLQRLAIAQSRVLIASG
VPTVPVKNLTGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIQSIPGI
SHSCRKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLSAPSGYKGPQPAVKPD
LVGKLVKCSHVFHLHCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHIIPHAL
PGHADCKTIRIIYNIPPGVQGPEHPNPGKSFTARGFPRHCYLPDSEKGRKVLKLLLVAWD
RRLIFAIGTSSTTGESDTVIWNEIHHKTEFGSNLTGHGYPDINYLDNVLAELAAQGITEE
SLAQEKD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcatcaccatccagcgcgcctacgagaagcagcacccctgggtggacctg
agcgccatcggcttctgctacgtcatcgacttcgccaccatgggccagatcaaccggcag
acccagcgcaagcgccgcgtgcgccgccgcctcgacatggtgtacccgctggtgtcgggc
accctgcccaagtcgcagtcgtggccggccagccccggggcggcggcgggggccggcgct
tccagcagcccccccggcgtgggcggcggcaaaggctcccggcccggcctgggcaccctg
aaccgcagccacctgcagcgcctggccatcgcccagtcccgcgtgctcatcgcctcgggg
gtccccaccgtccctgtgaagaacctcactggctccagccccgtcaacccagcgctggca
ggtatcacggggatcctcatgagcgcggccgggctgcctgtgtgcctgacccggcccccc
aagctggtgctgcaccccccgcccgtcagcaagagcgagatccagtccatccccggcatc
tcccactcctgccgcaagaccaccaagaaacaggccaagaagggtaaaaccccagaggag
gtgctgaagaaatacctgcagaaggtgcggcatccgccggatgaggactgcaccatctgc
atggagcggctctctgccccctctggctacaaggggccccagccagccgtcaagcctgac
ctcgtggggaagctggtcaagtgcagccacgtcttccaccttcactgcctggtggccatg
tacaacaacggcaacaaggatgggagtctgcagtgtcccacctgcaaaaccatctatggg
gtgaagacagggacgcagcctcctgggaagatggaatatcacatcatcccgcacgcgctg
cccggccacgccgactgcaaaaccatccgcatcatctacaacatccccccgggggtgcag
ggaccagagcatccaaaccctgggaagagtttcacggcccgtggcttccctcggcactgc
tacctgccagacagcgagaagggcaggaaggtactgaagttgctgctggtggcctgggac
cggcggctgatcttcgccatcgggacctccagcaccacgggcgagtcggacacggtgatc
tggaacgagatccaccacaagaccgagttcggctccaacctcaccggccacggctacccc
gacatcaactacctggacaatgtcctggctgagctggcagcccagggcatcacagaggag
agcctggcgcaggagaaggactga
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