Ficedula albicollis (collared flycatcher): 101820491
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Entry
101820491 CDS
T02815
Symbol
TCF7
Name
(RefSeq) transcription factor 7 (T-cell specific, HMG-box)
KO
K02620
transcription factor 7
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04310
Wnt signaling pathway
fab04520
Adherens junction
fab04916
Melanogenesis
fab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101820491 (TCF7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101820491 (TCF7)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
101820491 (TCF7)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101820491 (TCF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101820491 (TCF7)
Transcription factors [BR:
fab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
101820491 (TCF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
101820491
NCBI-ProteinID:
XP_016157227
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All DBs
Position
13:complement(9875818..9949520)
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AA seq
492 aa
AA seq
DB search
MPQLGSGGGDDLGATDEMLAFKDEGEQEEKIPENAFTERDLADLKSSLVNESEGSGSPLS
LLPVQALRRVQDPQRVYQEKLPDHMDDAGMKHQDPGMYKGSAYSGYPFLMLSDPYLPNGS
MSPLSNKVPVVQPSHGVHPLTPLIPYSNDHFSHGSHSPHLPADINQKQGVHRPSQTSDIP
GFYPLPPSGVGQITPSMGWQSQSVYPLPSCGFRQPYSSALSAGASFSRFTHPLMLGSGMH
TTGIPHPAIVPHSGKQEMEHYDRNMKPQPEPKREKEAKKPTIKKPLNAFMLYMKEMRAKV
IAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKR
RTREKQQDSNSDPASPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGEGRCASPVSSDGS
AIDSPPSPPDALRCIPSAFPSEQLAAPADPEHRDQPDPCPVSAHLPPASGPSRPGARRCS
APPAHSRASSGT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgggcagcggcggcggggacgacctgggcgccacggacgagatgctggcc
ttcaaggacgagggcgagcaggaggagaagatccctgagaatgccttcaccgagcgcgac
ctggccgacctcaagtcctcgctggtgaacgagtcggagggcagcggcagccccctctct
ctcctccccgtgcaggccctccgccgagtgcaggatccgcagagggtgtaccaggagaag
ctcccggaccacatggatgatgcaggtatgaaacatcaggacccgggaatgtataaagga
tctgcctattctggttaccctttcctgatgctctcagatccgtatctgcccaatggatct
atgtcacctctgtccaacaaagttcccgtggtgcagccgtcgcacggagtgcaccctctg
accccgctcatcccctacagcaacgaccatttcagccacggctcccactcgccccacttg
cccgctgacatcaaccagaaacaaggagtgcaccgtccttcccagacctcagacatccct
ggtttctaccccctgccccccagtggagtgggccagatcacgccgtcgatgggctggcag
agccagtctgtctatccgctcccgtcatgtggatttagacagccgtattcgtcagcgctc
tctgctggggcttctttctccaggttcactcacccgctgatgctgggctctggcatgcac
accaccggcatcccgcaccccgccatcgtgccccactccggcaagcaagagatggagcac
tacgaccgaaacatgaaacctcagccagaaccaaagagagagaaggaagccaagaagccc
actattaagaagcccctgaatgctttcatgttgtatatgaaagaaatgcgggcgaaagtc
atcgccgagtgcaccctgaaagagagcgctgccatcaaccagatcttgggaaggaggtgg
cacgcgctgtcccgagaggaacaagccaagtactatgagctggctcgcaaggaacggcag
ctccacatgcagctctaccccggctggtctgccagagacaactatgggaaaaagaagaga
cgaacacgggaaaagcagcaagattccaactcagatcctgcttctcctaagaaatgcaga
gctcgctttggcctcaaccaacaaacggactggtgcggcccgtgcaggaggaaaaagaag
tgcattcggtacctacaaggagaaggacgctgtgccagcccagtttcttccgatggaagt
gctatagactcccctccatccccaccggacgcactccgatgcatcccctccgccttcccg
tcagagcagctcgcagcccccgccgaccccgagcaccgcgaccagcccgacccctgcccc
gtgtccgcgcacctcccgcccgcctccggcccctccagaccaggcgcccggcgctgctcg
gcgccccccgcccacagccgcgcctcctcggggacatag
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