Ficedula albicollis (collared flycatcher): 101820558
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Entry
101820558 CDS
T02815
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03030
DNA replication
fab03410
Base excision repair
fab03420
Nucleotide excision repair
fab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101820558 (RFC5)
03410 Base excision repair
101820558 (RFC5)
03420 Nucleotide excision repair
101820558 (RFC5)
03430 Mismatch repair
101820558 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fab03032
]
101820558 (RFC5)
03036 Chromosome and associated proteins [BR:
fab03036
]
101820558 (RFC5)
03400 DNA repair and recombination proteins [BR:
fab03400
]
101820558 (RFC5)
DNA replication proteins [BR:
fab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101820558 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
101820558 (RFC5)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101820558 (RFC5)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101820558 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
101820558 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_16
AAA_24
AAA_11
AAA_lid_RFC1
AAA_assoc_2
DEAD
nSTAND_NTPase5
AAA_14
ResIII
RuvB_N
DUF815
AAA_5
AAA_30
AAA_19
DNAX_ATPase_lid
PhoH
TniB
AAA_7
TIP49
ATPase_2
nSTAND3
AAA_25
Thioredoxin_6
IstB_IS21
bpMoxR
Hydantoinase_B
Gp44_lid
AAA_28
Motif
Other DBs
NCBI-GeneID:
101820558
NCBI-ProteinID:
XP_005054806
UniProt:
A0A803VKK7
LinkDB
All DBs
Position
15:13170981..13174000
Genome browser
AA seq
329 aa
AA seq
DB search
MAPAGSANLPWVEKYRPQALSELVSHRDILSTVQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYREREFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQ
EEGVDVTEDGMKALVTLSSGDMRRALNILQSTSMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKITELKALKGLALQDILTEIHLFVHRVDFPPSIRMQLLIKLADIEYR
LAAGTSEKIQLSSLIAAFQVTRDLVVAEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggcgggcagcgccaacctgccgtgggtggagaagtaccgtccgcaggcgctg
tccgagctggtgtctcaccgggacatcctcagcaccgtgcagcgcttcatcagcgaggac
cggctcccccatctgctcctctatgggccgcccggtaccgggaagacatccaccatcctg
gcctgtgccaggcagctgtaccgggaacgggagttcggctccatggtgctggagctcaac
gcctccgatgaccgaggcatcgacatcgtccgagggcccatcctgagctttgccagcacc
aggaccatctttaagaaaggcttcaagctcgtcatcctggatgaagctgatgccatgacc
caggatgctcagaacgccctgaggagagtgatcgagaagttcacagaaaacactcggttt
tgcctcatctgcaactacctctccaagatcattcctgccctgcagtcccgctgcacccgc
ttccgctttggccccctgaccccggagctgatggtgccgcggctgcagcacgtcatccag
gaggagggggtggacgtgaccgaggacgggatgaaggctctggtgacgctctcgagcggg
gacatgcgccgggccctcaatatcctgcagagcacctccatggcctttgggaaggtgaca
gaggagaatgtttacacctgtacgggacatcccctcaagtctgacatcgccaacatcctc
gactggatgctgaaccaggatttttccactgcctaccgcaaaatcacagagctgaaggcg
ctgaagggcctggccctgcaggatatcctcactgagatccatctctttgtgcacagagtt
gacttccccccctccatccgcatgcagctgctgatcaagctggcagacatcgagtaccgc
ctggcagctggcaccagcgagaagatccagctgagctccctcatcgccgccttccaggtc
accagggacctggtggtggctgaagcctga
DBGET
integrated database retrieval system
