Ficedula albicollis (collared flycatcher): 101820618
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Entry
101820618 CDS
T02815
Symbol
ABCA4
Name
(RefSeq) ATP binding cassette subfamily A member 4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101820618 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fab02000
]
101820618 (ABCA4)
Transporters [BR:
fab02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101820618 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
101820618
NCBI-ProteinID:
XP_016155549
LinkDB
All DBs
Position
8:complement(20086737..20151880)
Genome browser
AA seq
2340 aa
AA seq
DB search
MNFFRQVRLLLWKNWILRKRQKLRFLVELVWPLTLFLALVWLRKANPLYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFRSPTHGEGPGVVSNYNNSILARVYKDAQELLLEAPEVR
DLGRIWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLENVGLTDFVVYQ
LINAQVRPEQFAYGVPNLTLKDIACSEMLLDRFIIFSSRRGLPSVHKAMCALSQDSLQRV
EDALYANVDFFKLFQLLPTVLDRNSPGADLKAWGRVLSNVSQTVQKLVRKPSVQDLLRVL
QPFVQDGRPESLGHLVSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDTTRKKSGY
LYDNTTTPFCNALIQNLESNPLTKIAWSAVKPLLMGKILFAPDSPSVREIIKNANSTFEE
LERLQLLTKAWEEVGPQLWYFFQNSLQMNMIRDSLKHPTVREFLNSQMGAEGFTAEHIIN
FLHNGSSGSREKGMVDFDWRNIFSAVDQVLRLLSQYLQCLTLDKFEGYLDETQLTPQALY
LLEENKLWAAVVFPDLEPTTSNLPPHVTYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIERGIIETQTSTEVPLGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGITNGVIWCTWFLDSFSMMAVSTFLLTALIM
HGQVLHYSNPLLFFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIVCF
VWQDRLTVNLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
NMMLFDAFLYGILSWYLDNVFPGDYGLPQPWYFPVLESYWLGPRSPEAEKTAAADEKTPE
SEGCVDQKTMEREKNESNTNKSEEPEKTEEKSDSQGKKEGKNKQCKHKREKEPGEQGKPK
TDVQDKDEININTFFEPEPTGLIPGVCIQNLVKIFANRPKPAVDGINITFYEGQITAFLG
HNGAGKTTTMSILTGLFPPTSGTVLVGGLDIQTHMDSIRHRLGMCPQHNILFNHLTVAEH
ILFYSQLKGRSREEAEQELETMLEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVV
VLDEPTSGVDPYSRRSIWDLLLKYRPGRTIILSTHHMDEADILGDRVAIISQGKLFCSGS
PVFLKNCFGSGFYLTLVRKMRTTKMGRATSFCSCGSQCSCSCSSCMHRGEEGAPEMELDG
DLNELAEVIHHHIPEAKLIESIGQELIYLLPNKNFKQRSYASLFRELEETLDDLGLSSFG
VSDTPLEEVFLKVTAEADPEMQKTGDTQENGSALGKTPTENKPAEQTALKTNDTSRMPVG
RAGDQNEGKGSRQYKGFQLVHQQIKALLIKRFHRASRSHKDFLAQVLTDLCRSRFFPTTF
SMCHMVFLLXLLCVLQYNGLKKYFIKKFLSYSLSNERPGNEQMVSLTHAFLNKPGFGIRC
MKNQPLLSYPCNNMPTAWDTPAVHPNLSSLLLSQQWSPENPSPSCKCSTHKKLTMLPECP
AGAGGLPPPQRVQRSTEILQDLTHRNISDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIG
GRLPVLHVSGDQIVNFLSDLGRMMNVTGGQTSLAAAKEIPNFLKYMETEDNIKVWFNNKG
WHAMVSFLNVANNAILRANLRTGQDPEEHGITAINHPLNLTKEQLSEVTVLTTSVDAVVA
ICVIFAMSFIPASFVLYLIQERVTKAKHLQFVSGVSPVTYWLTNFMWDIVNYALSAGMVV
AIFVGFNKKAYASPTNLPVLVSLLLLYGWAVIPMMYPASSFFSIPSTAYVALSCINLFVG
INSSAITFILELFENNPSLLKFNKTLKNVLLVLPHFCLGRGLIDLAMNQAVTEVYARFGE
EHISDPFQWDFVGKNLVAMALQGVVFFFLNLFMQHHLFSTRWFAQTAMSPIINEDEDVAE
ERKRIMNGGNKTDILQLQELTKIYAGQHKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFK
MLTGDTDVTSGDAVVAGNSILTHISNVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVP
AEEIKRVAEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDP
QSRRLLWDSIVGVLRDGRAVVLTSHSMEECEALCTRLAIMVQGTFKCLGTIQELKYKFGD
GYIVTLKIKAPKSGLPPDPAPAEKFIRINFPGSLQREKHYNMLQYQICSSSLAKIFRLII
SNKENLHIEEYSVSQTTLDQVFVNFAKQQMEDEEIPLHPRAAGASRETKVSPALHQQAVA
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctttaggcaagtcagacttctactctggaagaactggatccttcggaaaaga
caaaagcttcgttttctagtggagcttgtatggcctctgacattgtttcttgcacttgtc
tggctgaggaaagctaatccactgtatcgccaacatgaatgtcacttcccaaacaaggca
atgccatcagcaggaacattgccatggttacatggcatcttctgtaacatgaacaatcct
tgttttcgcagcccaacccatggagagggtccaggtgtggtgtccaactacaacaattcc
atccttgcaagggtatataaagatgctcaggagcttttactggaagctcctgaagtccgt
gaccttggaagaatctgggaagaactgatcattatgactcaatttatggaaacaatgaga
actaatcctgaaagaattgcaggaagaggaatacgaattctagacattttgaaagatggg
gagaccctcacttccttcttgctagaaaatgttggcctcacagattttgttgtttaccag
cttattaatgctcaagtgcgccctgaacagtttgcctatggtgtccctaacttgactctg
aaggacattgcttgcagtgagatgctcctggaccgctttattatcttcagcagccgaaga
ggtctcccttctgtacacaaggccatgtgtgccctgtcccaggacagtcttcaaagagta
gaagatgccttgtatgcaaatgttgatttctttaagctatttcagctgcttcccaccgtg
ttggacagaaactcaccaggtgctgacctgaaggcctgggggagggtgctgtctaatgtc
tcccaaacagtgcaaaagctggtcaggaagccaagtgttcaggaccttttgagggttctg
cagccatttgtacaagatggaaggccagaatccttaggccacttggtgagttccttgtcg
gatcttttctgtggctacccagaaggaggtggatcccgagtgctttccttcaactggtat
gaagataacaactacaaagctttcctggggattgacacaacaaggaagaaatctggttat
ctttatgataatacaaccacacccttttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggagtgctgtgaagcccctgctgatgggaaaaattctgttt
gctcctgattcaccttccgtacgggaaatcataaaaaatgcaaactccacttttgaggaa
cttgaacgtctccagctgttgaccaaagcttgggaggaagtaggacctcagctgtggtac
ttctttcaaaacagcctgcaaatgaatatgatccgtgactctctgaagcaccctacagtg
agggagttcctgaacagccagatgggtgcagaaggcttcactgcagaacatataatcaac
tttctccacaacggatcttcggggagccgggaaaagggaatggtggactttgactggcgg
aacatcttcagtgctgtagaccaagttctgcgtttgctcagtcagtatttgcagtgtttg
accttggataaatttgaaggttatcttgatgaaactcagctgactcctcaagccctttat
ctgctggaggaaaacaaattatgggctgctgtggtttttccagacttagaacctacaacc
agcaatctcccaccacacgtgacatacaagatccgaatggacatagacgcagtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccacgagctgatcctgtggatgat
ttacgttatatctggggaggctttgcatatctgcaggacatgattgagcgtgggattata
gagacacagaccagcactgaagtgccattgggaatttatctgcagcaaatgccgtatcca
tgctttgtggatgatgtcttcatgatcactttaaaccgagcctttcccatcttcatggtg
ctagcttggatatattcagtgtccatgactgtgaagagtatagtgctggagaaggaaatg
cgtctgaaagaggctatgaagaacaggggcataaccaacggcgtgatttggtgcacttgg
tttctagacagcttttccatgatggctgtgagcacattcctcctcacagctctgattatg
catggacaagtgctacattatagcaatccacttctcttctttctattcttactgacattc
accacagccaccataatgcagtgtttcttgttcagcaccttcttctccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcaccttgtacctgccccacattgtctgcttt
gtctggcaagaccgtctgactgttaatctgaagatcctagcaagtctgctttctcaagta
gcctttgggttcggtacggaatacttgtcacgctatgaagaacaaggtcttggcctacag
tggggtaacatcagaaccagtcccttggagggagatgaatatagttttcttttttctatt
aacatgatgctttttgatgcctttctctatggaatactttcttggtatctcgataacgtt
tttccaggggactatgggttaccacagccttggtatttccctgtgctggaatcctattgg
cttggccccagaagcccagaagctgagaaaacagcagctgctgatgaaaaaactccagaa
tcagaaggttgtgtggatcagaagaccatggaaagggaaaaaaatgaaagcaacacaaat
aaatctgaagaacctgaaaagacagaagaaaagagtgacagccaggggaagaaggagggt
aaaaacaaacaatgtaaacacaaacgagaaaaagaacccggcgagcaggggaagcctaag
acagatgtccaggacaaagatgaaattaatataaataccttctttgagcccgagcccaca
ggactgattccaggagtatgcattcagaacctggtgaagatttttgcgaacaggcccaag
ccagcagtagacgggataaatattactttttatgagggtcagatcacagccttccttggt
cacaatggagcaggaaagacaactaccatgtccatactgacaggcctgttcccacccaca
tctggaactgtgctggttggtggcctggacatccagactcacatggactccattcggcac
agattagggatgtgccctcagcacaacatcttattcaaccaccttactgtagcagagcac
atcttgttttattctcaattgaaaggaagatccagggaagaagctgagcaagagctggaa
acaatgctggaagacatgggcctcacccataaaagaaatgaagaagctcagaatttgtca
ggtggaatgcaaaggaaactgtctgttgccattgcttttgtgggtgaagcaaaagtggta
gtcttggatgagcccacttctggagttgatccgtattccaggcgatccatctgggatctt
ctgctgaaatatcgcccaggcagaactattatcctgtcaacccatcatatggatgaggca
gacatccttggagacagagtagccatcatatcccaagggaaactcttctgctcaggctct
cctgtattcctaaagaactgttttggctctggcttttatctcaccctcgttcgcaaaatg
agaaccacgaaaatgggaagggctacatcattttgtagctgtggatctcagtgctcctgc
tcctgctccagctgtatgcacaggggtgaagaaggagctccagagatggaactggatgga
gatctaaatgagctagcagaagtaatccaccatcatatcccagaagcaaaattaattgaa
agcattggtcaggaactgatttatcttttgcccaataaaaactttaaacaacgatcttat
gccagtctcttcagagaactggaggaaacgttggatgacctgggactcagcagttttgga
gtttcagacacaccacttgaagaggttttcctaaaggtcacagcagaagctgaccctgaa
atgcaaaaaacaggagatactcaagaaaatggttctgctcttggcaaaactcctactgag
aacaaaccagctgagcaaaccgccctgaaaactaatgacacttctcgaatgccagtaggc
agagcaggagatcaaaatgaaggcaaagggtcccgacagtataaaggctttcagcttgta
catcagcagatcaaagcactgctcatcaaacgcttccaccgcgcctcccgcagccacaag
gacttcctagcacaggtattgactgacttgtgccgttctagattctttcccacaacattc
tcaatgtgccatatggttttccttctctagttgctatgtgtattacagtacaatggtttg
aaaaaatatttcataaagaaattcctgtcttattccctcagcaatgaacgtcctggcaat
gagcagatggtctcccttactcatgctttcttgaataaaccaggatttggaattcgctgt
atgaagaatcaacctcttttgagctacccatgcaataacatgccaactgcctgggacaca
cctgctgttcatcctaaccttagcagcctcctgctgagccagcagtggagccctgagaat
ccatcaccttcctgcaagtgcagcactcacaagaaactcactatgctgccagaatgccct
gcaggtgcaggaggcctcccaccaccacagagagtgcaacgcagcacagaaattcttcaa
gatctgacccacagaaatatttcagattttctggtgaaaacatatcccactttgataaaa
ggaagcttgaagagtaaatactgggtcaatgagcaaagatatggaggaatttctatagga
ggaaggcttccagtccttcatgtttctggagatcaaattgtcaattttttaagtgatctt
ggccgaatgatgaatgtgacaggaggacaaacttcactggctgctgctaaagaaatccct
aatttccttaaatacatggaaactgaagacaatattaaggtgtggtttaacaataaaggc
tggcatgctatggttagcttcctcaatgtagccaataatgcaatcctcagagctaatctg
aggactggccaagaccctgaggaacatgggatcactgctataaaccatcctctgaacctc
accaaggagcaactctctgaagtcactgtgctgaccacttcagtggatgctgttgttgcc
atctgtgtgatttttgccatgtcctttataccagccagttttgttttatatctgatccaa
gagcgtgtaacaaaagccaaacatctccagtttgtcagtggtgtgagccctgttacctac
tggctaactaacttcatgtgggacatagtgaattatgcactgagtgctgggatggttgtg
gctatatttgttggattcaacaagaaagcatatgcctctccaaccaatctccctgtgctt
gtgtccttgctgctcctgtatggatgggcagtaattcccatgatgtaccctgcttcttct
ttcttcagtatccccagcactgcttatgttgcattgtcttgtattaatctctttgtggga
atcaacagcagtgccattacattcatcctggaattatttgaaaataacccgtctttgctg
aagtttaataaaacattgaaaaatgtactgcttgtcctcccacatttttgtttgggccgt
ggactcatcgacttggccatgaaccaagctgtgactgaagtatatgcaaggtttggtgag
gagcatatttctgatccctttcagtgggattttgttggaaagaatctggttgccatggct
cttcaaggagttgtgttcttctttctgaatctctttatgcagcaccatttgttctccaca
agatggtttgctcagactgccatgtcacctattattaatgaagacgaggatgttgcagaa
gaaagaaaaagaattatgaatggaggaaacaaaacagatatcttacaattacaagaactg
accaagatttatgcaggtcaacacaagcctgcagtggacagactctgtgttggcatccgt
cctggagagtgctttggccttttgggagtgaatggtgctggcaaaacaacaacattcaaa
atgctgaccggagatactgatgtgacatctggagatgctgtagttgctggcaatagtata
ttgacccacatttctaatgtccatcaaaacatgggatactgccctcagtttgatgccatt
gatgacctgctcacaggacgggaacacctctatttatatgcacgcttgaggggggttcca
gcagaagaaatcaagagggttgctgaatggggcatccagaagctgggactccctatgtac
gcagaccacctggcagggacctacagtggtggcaacaagcgcaagctctccactgccatt
gccctgataggctgcccaccactcgtcttgctagatgaaccaactacggggatggaccct
cagtcccggcgcctcctgtgggactccattgttggcgtgctcagggatgggagagcggtg
gttctaacctcacacagtatggaagaatgtgaagccctctgtactcgtttagccatcatg
gtgcaaggtaccttcaaatgcctaggcacaattcaagaactaaaatacaagtttggagat
ggctacattgtcactctgaaaatcaaagctccaaagtctgggctgcctccagatcctgct
cctgctgagaaattcatacgcatcaacttcccagggagtttacagagagagaaacactac
aacatgctgcagtatcagatttgctcttcctctctggctaagatttttcgattaataatc
tccaataaggaaaacttgcatattgaagaatattctgtatctcaaacaacattagatcag
gtttttgtgaactttgctaaacagcagatggaggatgaggaaattcctttgcatccacgt
gcagctggagccagccgagaaaccaaggtgtccccagctctgcatcagcaggcagttgca
tag
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integrated database retrieval system
