Ficedula albicollis (collared flycatcher): 101820626
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Entry
101820626 CDS
T02815
Symbol
RRP9
Name
(RefSeq) ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)
KO
K14793
ribosomal RNA-processing protein 9
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fab03009
]
101820626 (RRP9)
Ribosome biogenesis [BR:
fab03009
]
Eukaryotic type
90S particles
Other 90S particles
101820626 (RRP9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IP5PC_F
ANAPC4_WD40
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
WDR54
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_RFWD3
Troponin
WD40_like
Motif
Other DBs
NCBI-GeneID:
101820626
NCBI-ProteinID:
XP_005053187
LinkDB
All DBs
Position
12:7023617..7027769
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AA seq
587 aa
AA seq
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MAKDGSLELHKGHGKGPEAMPDSGAWLRVPGGQNELMMISEVAIHCHCHLAGLPAAGLGP
KGHGGQRTQRWGPGGPGALTTELRVAGKRGRSPGKARAAGREGGRRARKGDLAGVAAVPL
SLRPSRRSPHFVPQAPGADGRPRATAGRPADEEVSSDSETESPLLGRRRREAAEEEVEET
PQEKKLRLAKQYLEELRQLEEERAEEEEELEPADLIGDRLKEDVLEQKGRLQRLVAKDVR
PPDPARIRVLRGHQLPVTCLVISPDDRFIFSSSKDGSLIKWEVDSGKRLCVVPGGKKGTE
ERHMGHASHVLCMAISSDGKYLATGDRNKLIMIWDAATCKRLHIFTGHRDAVSGLSFRKG
THQLYSASHDRCVKVWDVAENAYVETLFGHQDVITGLDSLSRECCVTAGGRDGTVRLWKI
PEESQLVFSGHQGSIDCIQLINEEHMVSGADDGSLALWGLTKKKPLALAQQAHGEQDSQG
LQQPYWISAVAALRNSDLLATGSHSGSVKLWKCGEGFRKLEHLLDIPLVGFVNSLKFSAA
GDFLVAGIGQEHRLGRWWRIKEAKNSICIIPLKQKTTAPNPESPGSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggacgggtccctggagctccacaaaggacatgggaagggaccagaggccatg
cccgacagtggagcctggttaagggtccctggggggcagaacgagttgatgatgatatcg
gaagtagcaatccactgtcactgtcaccttgcggggctgccagctgcaggactgggcccg
aagggccacggggggcagaggacgcagcgctgggggcccgggggccctggggctctgaca
accgagctgcgggtcgccggcaagaggggccggtcgcccggtaaggcccgggccgcaggg
agagaaggagggaggcgggcgaggaagggcgacctcgccggggtcgccgctgtgccgctt
tcgctgcgcccgtcccgtcgatcgccccattttgttccgcaggcaccgggcgccgatggg
agaccgcgggccacagccggtcggcccgccgacgaggaagtgtctagcgactccgagaca
gagagtccgttgttggggcggcggcggcgagaggcggcggaggaggaggtggaggagacg
ccgcaggagaagaagctgcgcttggccaagcagtacctggaggagctccggcagctcgag
gaggagcgggcggaggaggaggaggaactcgagccggcagatctcatcggcgaccggctg
aaggaggacgtgctggagcagaagggccggctacagcgcctggtcgccaaagatgtacgg
cctccagatccagccaggatccgtgtgctgcggggacaccagctgcctgttacctgcctc
gtcatctctcctgatgacagattcattttttcttcttccaaggacggctccctcatcaaa
tgggaggtggacagtgggaagaggctgtgcgtggtgcccggggggaagaagggcacagag
gagcggcacatggggcacgcatcccatgtcctttgcatggccatttcatcggacggcaag
tacctggctacgggagacaggaacaagctgatcatgatctgggatgcagccacctgcaag
cgcctgcacatcttcacagggcaccgcgacgccgtttcaggcctgtccttccgaaagggc
acacaccagctgtacagtgcttcccacgaccgctgcgtcaaggtctgggatgtggcggag
aacgcatacgtggagaccctgtttggacaccaggatgtcatcacagggctggacagcctg
agccgggagtgctgtgtgacagcggggggacgggatggcactgtgcggctctggaagatc
cctgaggaatcacagcttgtgttttctgggcaccagggctccatcgactgtatccagctc
atcaatgaggagcacatggtgtctggtgctgatgatgggtctttagccctgtgggggctg
acgaagaagaagccgctggcgctggctcagcaggcgcacggcgagcaggacagccagggc
ctgcagcagccctactggatctcagctgtggctgccctgcgaaacagtgacctcctggcc
acagggtcccacagcggcagtgtgaagctctggaagtgtggtgaaggatttcggaagctg
gagcacctcttggacatccccttggtgggttttgtcaacagcctcaagttctcagcagct
ggtgacttcctggtggctggcattgggcaggagcaccggctcggacggtggtggagaatc
aaagaagccaaaaacagtatctgcatcatccccctgaagcagaagaccacagcccctaac
cctgaatcccctggcagctcctag
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