Ficedula albicollis (collared flycatcher): 101820716
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Entry
101820716 CDS
T02815
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
fab04054
]
101820716
Pattern recognition receptors [BR:
fab04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
101820716
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
TIR_2
LRR_5
LRR_14
LRR_9
LRR_NXF1-5
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
101820716
NCBI-ProteinID:
XP_005062453
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Position
Un
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AA seq
991 aa
AA seq
DB search
MRTPLLVTLVTLVLVPAGVSPYGFRNCIQAPWDPVLFRCIQRFLSDVGAAVGDLPSTATS
LNLSVNILRQVPPRAFAHLPHLYTLDLSNNQLELLAPGAFLGLSALAHLNLTHNNISVLA
TGVFTQLGNLSTLRLDHNPLQKVDPGAFQTLAALSTLLLRGGRLRALEPVAVAVGNLTHL
DLLDLCGNMLSTLGPGLPPALRVLRLCNNSLGALSGASPGVIPPGLRELDLSYNNISDPA
PLARLCLHNLTNLRLAGNPLDMVQLLRTAGVSPRHVDVSGLRVGTGDLDYLCQQLAGPRL
QRLQLQRLELKAMPKGALHKCPELGALDVSGNRLRSLGCIGWLLNRAQLATLGELVAEHN
LLQWLPSCKGAPVLHQLHNVSLRFNRILVADAGAFDNTPALRQLRLDVNGLARLHRAALR
GLRNLQHLRLDNNLLTDLLPGSFADLQQLEDLNLRNNRVAVLFPGTFRGLDHLKTLDLGG
NNLRYLAAKAFQGLLQLCRLYLDRNRLVEVTAEAFQPVQLTLGVLDLRANALRYLSRRLQ
QPPPFRYLHNLYDLKLQAQQPYGMRVVPQRFFQGLSALRSLYLSQNSLSAIPADAFDDLV
QLQFLTLADSNGGMGHLPAGIFKNLSRLRSLNLESAGLRSLGPEVFGNLTRLKQLRLAKN
ELRALDVTLATHLPALRYLDLRKCPLSCSCANAWLPGWLARGPVQVVYLYNYTCGEKGGA
SAYLHCFDTHVCYLDMGRYLFAGTAPAVLLLLLLPLLHHRGYWRLRYQLFLLRAWARGRW
RREQRRYTYDTFVSYNSGDERWVLEELVPELERGALRLCLHHRDFRPGRAIVDNIVDAVY
NSRHTVCVVSRGYLRSEWCSLEIQMASYRLFDELRDVLVLVFLEDIPEAELSAFHRMRRV
LLRRTHLRWPPEPPAQPLFWAKLRCALSAGQEEEDRERGGREEGKAVFCSKIIGFSLWNM
LCKVGMKGKFSPYFNLFNAAEAKGVAKPALL
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccccactgctggtgaccctggtgacattggtgttggtgcctgcaggggtctct
ccctacggcttccgcaactgcatccaggcgccgtgggacccggtgctgttccgctgcatc
cagcgcttcctgagcgacgtgggggctgcagtgggcgacctcccctccactgccacatcc
ctcaacctctctgtcaacatcttgcgccaggtgcccccccgtgcctttgcccacctgccg
cacctctacacacttgatctgagcaacaaccagctggaactgctggccccgggggctttc
ttggggctgtcagcactagcccatctaaacctgacccacaacaacatctcagtgctggcc
acaggcgtgttcacccagctggggaacctgagcacactgcggctggaccacaatccgcta
cagaaagtggatcctggggctttccagacactggcagcactcagcacgctcctgctgcgg
ggtggccggctccgcgcactggagcccgtggctgtggctgtggggaatctgacacacctc
gatctgcttgacctgtgtggcaacatgctgtcgacactgggcccagggctgcctcccgcg
ctgagggtcctgcgcctctgcaacaactccctgggagctctttcaggggccagccccggg
gtgattcccccagggctgcgtgagctcgacctgtcctacaacaacatctcggaccctgcg
ccgctcgctcgcctgtgcctgcacaacctgacaaacctgcgcctggctgggaaccctctg
gacatggtgcagctgctgcgcacggctggagtctccccacgccatgtggacgtgtcaggg
ctacgggtgggcacaggggacttggattacctgtgccagcagctggcagggccgcggctg
cagaggctgcagctgcagcgtttggagctcaaagcaatgcccaagggggctctgcacaag
tgtccagagctgggtgctctggacgtgtccggcaaccggctgcggtccttgggctgcata
gggtggctgctgaaccgggcacagcttgcaacactgggcgagcttgtggctgaacacaac
ttgctgcagtggctgccatcatgcaaaggggccccggttctgcaccagctgcacaatgtg
tccctacgcttcaaccgcatcctagtagctgatgcgggtgcctttgacaacacgccagcg
ctgcggcagctgcggctggacgtgaacgggctggcacggctgcaccgtgcagcactgcgt
ggactccgcaacctgcagcacctgcgtctcgacaacaacctgctcaccgacctcctgccc
ggctcctttgctgacctgcagcagctggaagacctcaacctgcgcaacaaccgtgtggcc
gtgctcttccctggcaccttcagggggctcgaccacttgaagacccttgacctgggcggg
aacaacctgcggtatttggcagccaaggcattccagggtctcctgcagctttgccggctc
tacctggaccgcaaccggctggtggaggtgacagcagaggcattccagccggtgcagctg
acgctgggcgtgctggacctgcgtgccaatgcgctgcgctacctgagccgacgcctgcag
cagccgccgcctttccgctacctgcacaacctctatgacctgaagttgcaggcacagcag
ccatatgggatgcgtgtggtcccacaacgcttcttccagggcctcagtgccttgcgctcg
ctgtacctgtcgcagaactcgctctcggccatccccgccgatgcctttgatgacctggtg
cagctgcagttcctgacgctggctgacagcaatggcgggatgggccacctgcccgctggc
atcttcaagaacctgagccgactgcgcagcctgaacctggagagcgcaggactgcgcagc
cttggccctgaggtcttcggcaacctgacgcgactgaagcagctgcgcctggccaagaac
gagctgcgtgcgctggacgtgactctggccacgcacctccctgccctgcgctatctggat
ctgcgcaagtgccccctgagctgcagctgtgccaacgcctggctgcctggctggctggca
cgtgggcccgtgcaggtggtctacctgtataactacacctgtggtgagaagggtggggcc
tccgcgtacctgcactgctttgacacgcatgtgtgctacctggacatggggcggtacctg
tttgcagggacggcaccggctgtgctgctgctgctgctgctgccgctgctgcaccaccgt
gggtactggcggctgcgctaccagctgttcctgctgcgtgcgtgggcacgtgggcgctgg
cggcgggagcagcggcgctacacctacgacaccttcgtgtcctacaactccggggatgag
cggtgggtgctggaggagctggtgcctgagctggagcggggagccctgcggctctgcctg
caccaccgcgactttcgccccggccgtgccatagtggacaacatcgtggacgccgtgtac
aacagccggcacacggtgtgcgtggtgagccgcgggtacctgcgcagcgagtggtgctcg
ctggagatccagatggccagctatcgcctcttcgacgagctgcgtgatgtccttgtcctc
gtcttcctcgaggacattcctgaggccgagctctcggccttccaccgcatgcgccgcgtg
ctgctgcggcgcacacacctgcgctggccccccgagccccctgcgcagcccctcttctgg
gcaaagctcaggtgtgccctcagcgcggggcaggaggaggaggacagggagagagggggc
agggaggaaggaaaagcagttttctgctccaaaattatcggcttttctctctggaatatg
ctctgcaaagtggggatgaagggcaaattttctccctatttcaacctcttcaatgcagca
gaggcaaaaggagttgccaagccagcactgctgtga
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