Ficedula albicollis (collared flycatcher): 101820751
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Entry
101820751 CDS
T02815
Symbol
ATG4C
Name
(RefSeq) autophagy related 4C cysteine peptidase
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04136
Autophagy - other
fab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101820751 (ATG4C)
04136 Autophagy - other
101820751 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fab01002
]
101820751 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101820751 (ATG4C)
03029 Mitochondrial biogenesis [BR:
fab03029
]
101820751 (ATG4C)
Peptidases and inhibitors [BR:
fab01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
101820751 (ATG4C)
Membrane trafficking [BR:
fab04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
101820751 (ATG4C)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101820751 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
101820751
NCBI-ProteinID:
XP_016155800
UniProt:
U3KDH4
LinkDB
All DBs
Position
8:29621784..29640503
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AA seq
459 aa
AA seq
DB search
MEATGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTEESGELST
DGSNFDKINTEISGNVEEFRRDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL
AQGLMLHFLGRAWVWPEALDMDSCDSESWTSSTVRKLTASFEASLTAERDPKVLPRPQRR
PSSRDWDGSQMRNEIYHRKIISWFGDSPVAAFGLHQLIEYGKKSGKMAGDWYGPAVVAHI
LRKAVEEARDPELQGVTVYVAQDCTVYSSDVIDRQCSFLDSGKAGTKAVIILVPVRLGGE
RTNTDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLESFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVK
GHSRDYDFASSPLHEENDLFSEDEKKRLKRFSTEEFVLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacggggacagatgaagtagaaaagatcaaatcaaagtttatgtctgcatgg
cacaacatgaaatacagttgggtgttaaaaacaaaaacttacttcagtaggaactctcca
gtctttctgttgggaaaatgttaccacttcaaaactgaggaatctggggagctctctaca
gatgggtccaattttgacaaaatcaacactgagatttcggggaatgtcgaggagttccgc
agagatttcatttctagaatctggctgacctacagagaggaattccctcagatcaagggc
tctgctttaaccacggactgtggctggggctgcacgctcagaacggggcagatgctgctg
gctcaggggctgatgcttcatttccttgggagagcctgggtgtggccagaagctctggac
atggacagctgtgactcagagtcctggaccagcagcactgtcaggaagctcacggcctcc
ttcgaggcgtcgctcacggccgagagggaccccaaggtcctgccccggccccagcgccgc
cccagcagcagggactgggatggcagccagatgaggaatgagatttatcacaggaaaatc
atctcctggtttggggactccccagtggcagcctttgggctgcaccagctcatagagtac
gggaagaagtccgggaagatggcgggggattggtacgggcccgccgtggtcgctcacatt
ttgagaaaagctgttgaagaagcaagagaccctgagctgcagggagtaacagtctatgtt
gctcaggattgtacagtctacagctctgatgttattgacagacagtgctcttttctggat
tctgggaaagcaggcacaaaagctgtaattatattggttcctgtgagacttggtggagag
agaacaaacacagactacttggagtttgtaaagggcattttaagcctggagtattgtgtt
ggcattattggtggcaaacccaagcagtcctattactttgctggattccaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagtcattccactgtccttctcccaaaaagatgtcattcaaaaaaatggatccg
agctgcaccataggattttactgtaggactgtgcaggactttgagaaggcttctgaggaa
atcaccaagatgctgaaatcttcatccaaggagaaatatcccctgtttacttttgtcaag
ggtcattctagagactatgactttgcttccagtccactccatgaagaaaatgaccttttc
tccgaggatgagaagaaaagactaaagagatttagtacagaggagtttgtcttgctctaa
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