Ficedula albicollis (collared flycatcher): 101820772
Help
Entry
101820772 CDS
T02815
Symbol
CASC3
Name
(RefSeq) cancer susceptibility candidate 3
KO
K14323
protein CASC3
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03013
Nucleocytoplasmic transport
fab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101820772 (CASC3)
03015 mRNA surveillance pathway
101820772 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101820772 (CASC3)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101820772 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
101820772
NCBI-ProteinID:
XP_016159776
LinkDB
All DBs
Position
27:complement(3746060..3755445)
Genome browser
AA seq
640 aa
AA seq
DB search
HPSLFCLQESEDGIEGDAVLSDYESAEDSEVEEEDYSEEESSKVELKQDSNDSCELAARG
EKGNEKVDPKGAVTGERQSGDGQESTEPVEKKVGKKVPKHLDDDEDRKNPAYIPRKGLFF
EHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHN
PDDIKPRRMRKPRFGSPPQRDPNWSNERPPKPPRHQSAKSPSAPPRSFNSRSSASTGRMP
PARNYPRMGGYKETRPGYRASEATVPHRNGEQAKQESGYRRKRAEQSPSRDTSPELEVAH
VHGSPGKEEGALENQATAADAAQPPADRPVEKKSYSRARRTRVKAGEAGKLAEEVPASEG
LAPVIPTPTAAETSPPPAKSNWESPVESSVDGLEQEMTQMNLTEQNWSPGQSRFIPPREL
RGIPNHMHVGTGPPPQFNRMEEMAVQGSRVKRYSSQRQRPPVPEPAPPMHISIVEGHYYD
PLQFQGPIYTHGENPAPLPPQGMIVQPEMHLPHPGLHPHQTPPAMANPGLYPPPVSMPPG
QPPPQQLLTPTYFSAPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQAQSQVYGGVTYYNT
VQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
cacccctctcttttctgtctgcaggaaagtgaggatggcatcgaaggagatgccgtgctc
tctgactatgaaagcgccgaggactcggaggtagaggaagaggattacagcgaggaagaa
agctccaaggtggagctgaagcaggacagcaacgattcctgcgagttggcggccagaggg
gagaaggggaatgagaaggtggatcccaagggagccgtgacgggcgagcggcagagcggg
gacgggcaggagagcacggagcctgtggagaagaaagttgggaagaaggttcccaagcac
ctggacgacgatgaggatcggaagaacccagcgtacatcccacgcaaggggctctttttt
gagcatgacctccgagggcagacgcaggaggaggaggtcaggccgaagggtcgtcagcgg
aagctgtggaaggatgaggggcgctgggaacacgacaagttccgtgaggatgagcaggcc
cccaagaccaggcaggagctgatagctctgtatggatacgacatccgctcagcccacaac
cccgacgacatcaaaccccggaggatgcgcaagccacggtttggcagtccccctcagcga
gaccctaactggtccaacgagaggccccccaagcccccaaggcaccagagtgccaagagc
ccctcggctcccccacggtccttcaacagccgcagctctgccagcactggcaggatgccc
cctgccaggaactacccaaggatggggggctacaaggagactcgtccaggctaccgggct
tcagaggcgactgtgccacaccggaacggggagcaagccaagcaggagagtggctaccgc
aggaagcgtgcagagcagagcccgtcaagggacacgtcccctgagctggaggtggcacat
gtccatggcagccctgggaaggaggagggggctctggaaaaccaagccacagctgctgac
gctgcgcagccgccggcggacagaccagtggagaagaaatcttattcccgggcaagaagg
accagagtcaaggctggggaggcggggaagctggcagaggaagtgcctgcttctgagggg
ctggctcctgtgattccaacacccacagcagctgagacctcccccccaccagccaagagc
aactgggagtcaccagtggaatccagtgtggatggacttgagcaggagatgacgcagatg
aacctgacagagcagaactggagcccggggcagtcccggttcatcccgcctcgggagctg
aggggtattcccaaccatatgcacgtgggaactgggccaccgccgcagtttaaccggatg
gaggagatggcagtgcaggggagccgtgtcaagcgctactcatcacagcggcagagaccc
cccgtgccagagcccgcaccccccatgcacatcagcattgtggaaggacactactacgac
ccattacaattccagggaccaatctacacccacggtgagaacccagccccgctgccgccc
caagggatgattgtgcagccggagatgcacctccctcatccaggtttacacccccaccag
acgccccctgccatggcaaaccccggcctgtaccccccaccagtgtccatgcccccgggc
cagcccccgccacagcagctgctcactccgacttacttctccgcccctggagtgatgaat
ttcgggaatcctggctacccctacccccctggagctctgccccctccgccccctcctcat
ctctattccaacacgcaggcgcagtcccaggtctatgggggggtcacctactacaacact
gtccagcagcaggtgcagcccaagccctccccgccccgccggacgtcccagcctgtgacc
atcaagccgccccctccagaggacagcaaaggtgaaaaatcaaaggagaggagcaacacg
tag
DBGET
integrated database retrieval system
