Ficedula albicollis (collared flycatcher): 101820946
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Entry
101820946 CDS
T02815
Symbol
TPM1
Name
(RefSeq) tropomyosin 1 (alpha)
KO
K10373
tropomyosin 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04260
Cardiac muscle contraction
fab04261
Adrenergic signaling in cardiomyocytes
fab04814
Motor proteins
fab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101820946 (TPM1)
04820 Cytoskeleton in muscle cells
101820946 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
101820946 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
101820946 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fab04812
]
101820946 (TPM1)
04147 Exosome [BR:
fab04147
]
101820946 (TPM1)
Cytoskeleton proteins [BR:
fab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
101820946 (TPM1)
Exosome [BR:
fab04147
]
Exosomal proteins
Exosomal proteins of microglial cells
101820946 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
CCDC39
Rod_CreS
Sec2p
TMF_DNA_bd
Lebercilin
ERM_helical
PUMA_CC
HAUS1
MscS_porin
ADIP
CENP-F_leu_zip
DUF745
ATG16
Laminin_I
GAS
FKBP15
DUF4200
DUF1664
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
101820946
NCBI-ProteinID:
XP_005052097
LinkDB
All DBs
Position
10:19094735..19115929
Genome browser
AA seq
281 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKY
SESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVTKLEKSIDDLEDQLYQQLEQNSRLTNELKLALNED
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctgaagctggacaaggagaacgccttggac
agagctgagcaagccgaagcggacaagaaggcagcggaggagagaagcaagcagctggag
gatgagctggtggctctacaaaagaagctgaaggccaccgaggatgagctggacaaatac
tccgagtcccttaaagatgcacaagaaaagttggaactggctgacaaaaaggccacggat
gctgagagtgaagtagcttctctgaacagacgcatccagctggttgaggaagagttggat
cgtgctcaggagcgcttggctactgccctgcagaagctggaggaggctgagaaggctgca
gatgagagtgaaagaggaatgaaggtcattgaaaacagagcccagaaggatgaggagaag
atggaaatccaggagatccagctgaaagaggcaaagcacattgctgaagaggctgaccgc
aagtatgaagaggtggctcgtaagctggtgatcattgagagtgacctggaacgtgctgag
gagcgtgctgaactctcagaaagcaaatgtgctgagcttgaagaggaattgaaaactgtg
accaacaacctgaagtcgctggaggctcaggctgagaagtactcacagaaagaagataag
tatgaagaggagattaaagttctgactgacaaactgaaggaggctgagacccgtgctgag
tttgctgagaggtcagtaaccaagctggagaagagtattgatgacctagaagaccaactc
taccagcaacttgagcaaaacagtcgcctaactaatgagctaaagctggcattgaatgag
gattaa
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