Ficedula albicollis (collared flycatcher): 101821092
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Entry
101821092 CDS
T02815
Symbol
HNRNPM
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101821092 (HNRNPM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101821092 (HNRNPM)
Spliceosome [BR:
fab03041
]
Common components
Common spliceosomal components
hnRNP proteins
101821092 (HNRNPM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
RRM_MARF1
RRM_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101821092
NCBI-ProteinID:
XP_016159975
LinkDB
All DBs
Position
28:complement(5211654..5229310)
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AA seq
685 aa
AA seq
DB search
MKRGGNRFEPYASPARRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRG
CAVVEFKMEESMKKAAEVLNKHSLGGRPLKVKEDPDGEHARRAMQKVMAAGGMGIGPGPG
GPGMINIPPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVR
ADILEDKDGKSRGIGTVTFEQAIEAVQAISMFNGQLLFDRPMHVKMDERAFPKGDFFPPE
RPQQLPHGLGGIGMGLGPGGQPIDANHLNKGMGMGNMGPGGMGMEGMGFGMNKMGGMEGP
FGGMENIGRFPAGMNMGRMSEMDRAMGGGFEREFGRNEMGMSRSFGETLERGIGGGNASI
PGMERMAPGMERMGAGMERIPAAMGHGMERVGADIDRMGLVLDRMGSGVERMGAGMERMA
PLGIDHLAPNLERMGPGMERMGSGMERMGSGIGFGMERMGAAMERVGGAVDRMGSGVERM
GAGMERMGMGLERMVPAGMGAGMGQVMERMPAGLERIPGPPMDRIGIERMGAAPMDRMGL
ERIGAANMERMGPPMGQGMGAGIERMGLAMGSNFERPIDMERGNFAGNFAGSLGGAGGPA
AGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVRFESPEVA
ERACRMMNGLQLRGREIDVRIDRNA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggggcgggaaccgcttcgagccctacgccagccccgccaggaggtaccgcgcc
ttcatcaccaacatccccttcgacgtcaagtggcagtcgctgaaggacctggtcaaagag
aaagttggtgaggtaacatacgtggagctcttaatggacgctgaaggaaagtcaagggga
tgcgcggtggttgagttcaagatggaagagagcatgaagaaggctgctgaggttctgaac
aagcacagtcttggtgggagacccctgaaagtgaaagaagaccccgacggggagcacgcc
aggagggccatgcagaaggtgatggcagcaggagggatgggcattgggcctggccctggt
ggccctggcatgatcaacatcccccccagcatcctgaacaaccccaacatccccaacgag
atcatccacgccctgcaggccggccgcctcggcagcaccgtcttcgtggccaacctggac
tacaaggtgggctggaagaagctgaaggaggtgttcagcatggctggggtggtggtcagg
gccgacatcctggaggacaaggacggcaagagccgcggcatcggcaccgtcaccttcgag
caggccatcgaggccgtgcaggccatctcaatgttcaatgggcagctgctctttgacaga
cccatgcacgtcaaaatggatgaacgagcctttcccaaaggagatttcttccctccagag
cgaccccagcaactccctcatggtcttggtggtattggcatgggattaggacctggaggt
caacctattgatgcaaatcatttaaacaaaggcatgggaatgggcaacatgggacctgga
ggaatgggaatggaaggcatgggctttggaatgaataaaatgggaggaatggaaggtcct
tttggtggcatggaaaacatcggccgcttcccagccgggatgaacatgggcaggatgagt
gagatggatcgagccatgggagggggattcgagagggagtttggaagaaatgagatggga
atgtcccggagttttggagagaccttggagaggggaataggcggaggcaacgccagcatc
cccggcatggagcggatggcgccgggcatggagcgcatgggcgcgggcatggagcgcatc
ccggccgccatggggcacggcatggagcgcgtgggtgccgacatcgacaggatggggctg
gtgctggaccgcatgggctccggcgtggagaggatgggcgcgggcatggagcgcatggcg
ccgctgggcatcgaccacctggcgcccaacctggagcgcatggggccgggcatggagcgc
atgggctccggcatggagcgcatgggctcgggcatcggcttcggcatggagcgcatgggc
gccgctatggagcgcgtgggcggcgccgtggacaggatgggctcgggcgtggagcgcatg
ggggcgggcatggagaggatgggcatggggctggagcgcatggtgcccgcgggcatgggc
gcgggcatgggccaggtgatggagaggatgcccgcggggctggagcgcatccccggcccg
cccatggacaggatcggcatcgagaggatgggagcggcgcccatggacaggatggggctg
gagcgcatcggggccgccaacatggagaggatggggccgcccatggggcagggcatgggg
gctggcatcgagcgcatggggctggccatgggcagcaacttcgagcggcccatcgacatg
gagcggggcaactttgcagggaattttgcagggtccctgggaggagcaggaggccctgca
gccggcgtggcccggaaagcctgtcagatatttgtgagaaatctgccttttgattttaca
tggaaaatgctgaaagataaattcaatgaatgtggccacgtgctctacgccgacatcaag
atggagaacggcaagtccaagggctgcggcgtggtgcgcttcgagtcgccggaggtggcg
gagcgcgcgtgccgcatgatgaacgggctgcagctgcgcggccgcgagatcgacgtgcgg
atcgaccgcaacgcctga
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