Ficedula albicollis (collared flycatcher): 101821130
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Entry
101821130 CDS
T02815
Symbol
TDRD1
Name
(RefSeq) tudor domain containing 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101821130 (TDRD1)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101821130 (TDRD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Agenet
PCB_OB
DUF4537
Spore_coat_CotO
MYND_ZMYND11_ZMYD8
Tudor_4
zf-C6H2
DGF-1_beta-sheet
Motif
Other DBs
NCBI-GeneID:
101821130
NCBI-ProteinID:
XP_005048811
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All DBs
Position
6:28737481..28756872
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AA seq
886 aa
AA seq
DB search
MAEPLNLQRNGVADADLSNRVTGSSMEDKTGRENCIAAADKENTVSHSNWINGKPKKSQY
SSKSGFSICYDKSFLSLLVPPPKGGTCHRCGLFGKLRCSQCLQTYYCSADCQKNDWPAHR
VVCEPLKQNLSDSKTKTGVYLKEEVRLSFAVDVALPDSEDCLNKVPLEMKSHLTSGSGAK
EYSSRESENHSKESEKKLPEVEDSPHCANSVAKFVSLNIGDEFSGVVSHIQNPDTFFCQR
MQSACQLAELEASLNEYCNKLPSSSSFRPAAGNMCCAQFTEDNLWYRAAVRAYASEDTVF
VDYMDYGNSDSLPLTRLRPIIPSLMDLPAQAIRCSLAGVKPPWTSEGISYMKKLVKDKVL
TVKVVNKESSRFVVELTDASGTPAVNISSLLIEEGCAAEELSMALPPPTGSDVEQAKEDT
RNKRMCKWIKLTLNQTLSVIVCTVYNPGEFYCQISNSHELLALNSLNKSLSEYCQKTLPD
VFEPEDGDPCCAFYSEDGNWYRAVVQSITSNGSVRVSFVDYGNTEEVPLKNIRQISSSFL
KLPFQAIKCWLSGIKPGSSKWNPEATRRFHMYTSGLELQATVTSLSEDGAGVVLTDNSTD
CPKMINEILTAEKLVVKEVLQDKNNFPDKSVDQKATSLGHWKSIELAVDETMSVWVTEVV
SPDLFYAIPVPNTGQKKLLKELISLEDYCRSCDKQSFQPKLGEACCAQFSGNGNWYRAVV
LEASQSAVKVLYGDYGSTETLPLSKVLPIADSYLKLPFQTITCSLAGIEKAEWSPLVLDK
LKKLLLKQHVTITVKGINGNVNLVTVEKHLDNGYVNIADKLLKEGLVTSCSAENSHSKHQ
GNGGETNCCCTELKVQLEKHRQVLLFLLNKFGNPDGFTDMKNLLKH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccacttaaccttcaacgtaatggagttgcagatgcagatttaagcaacagg
gtcacaggaagttctatggaagacaaaactggtagagagaactgcatagctgcagctgat
aaagaaaatactgtgtcacattctaattggattaatgggaagccaaagaaatcgcagtat
tcctccaagagtggtttttctatttgctatgataagagtttcttgagtttgttagtacca
ccacctaaagggggcacttgccatcgttgtggtctttttggaaagctcagatgttcacag
tgtctgcaaacatactattgctctgcagattgtcagaaaaacgattggccagcacacaga
gttgtttgtgagccccttaaacagaatttaagtgatagcaaaaccaagacaggagtttat
ctcaaggaggaagtgaggttgagttttgctgtagatgttgctcttccagattctgaagac
tgcctaaataaagttcccttagaaatgaagtctcatttaacttcaggaagtggtgccaaa
gaatactcttcaagagaatccgaaaaccattcaaaggaaagtgaaaaaaaattacctgag
gttgaagactctcctcactgtgctaattcagttgccaagtttgtctccttaaatattgga
gatgaattttctggtgtggtttcccacattcaaaatccagacacctttttttgtcagcgg
atgcaaagtgcctgtcaacttgctgagcttgaagcgtctcttaatgagtactgtaacaaa
cttcccagtagttcgtcgttccgtcctgctgctggcaatatgtgctgtgcccagttcaca
gaagacaacctttggtatcgtgctgctgttagagcttatgcttctgaagacactgttttt
gtcgactatatggattatggtaactctgactctctgccactgaccagacttcgtcctata
attccaagcttaatggacttgccagctcaagccataagatgtagcctggcaggtgtaaag
ccaccatggacctcagaaggtatttcttacatgaaaaaactggtgaaagacaaagtgctg
acagtaaaagtagtgaataaagagagttctagatttgtggtggagcttacagatgcatca
ggtactccagcagtaaatatatcgagccttctcatcgaggaaggctgtgcagctgaggag
ctgagcatggccttaccaccacccacagggagtgatgttgagcaagccaaggaggacaca
aggaacaaaagaatgtgcaagtggattaaattaactcttaaccaaacactcagtgtcata
gtatgtacagtgtacaatcctggagaattctactgtcagatttcaaacagccatgagttg
cttgctctaaactcacttaacaaatcattgtctgaatactgtcagaaaacactaccagat
gtttttgagcctgaggatggagacccttgctgtgctttttactctgaggatggtaactgg
taccgtgctgtggtgcaaagtatcacttcaaatgggagtgtccgagtgagcttcgtggac
tatggaaatactgaggaagtaccactgaaaaatatccgacagatctcatcctcattccta
aaacttccatttcaagcaattaagtgctggctctcaggtataaagcctggaagtagcaaa
tggaatccagaagctacaagaagatttcatatgtacacttcaggtttagaacttcaagcc
acagtaacttccctttctgaagatggggcaggtgtagtgcttactgacaattccacagat
tgtccaaaaatgatcaatgagatactaactgcagaaaaactggttgtaaaggaagttcta
caagataaaaataactttccagacaagtctgttgaccaaaaagcaacctcacttgggcac
tggaagtcaattgaattggctgtagatgaaaccatgtctgtctgggtaacagaagttgta
agcccagacttgttctatgctataccagttccaaatacaggtcagaagaagctcctgaag
gagctgatttcactggaagactattgtagatcttgtgacaaacagtccttccagccaaaa
ctgggtgaagcctgttgtgctcagttttcaggtaatggcaattggtacagagctgttgtt
ctggaagcttcccagtctgcagtgaaagtcctgtatggagactatggcagcacagaaact
ttacccctttcaaaggtgctgccaattgctgattcctatttaaagctgccttttcagaca
attacttgttcacttgcaggaatagagaaagctgagtggtctccattagtgcttgacaag
ttgaaaaaactgttattgaagcaacacgtcacaattacagtgaaagggattaatgggaat
gttaatttagtaacggtggagaaacacttggacaatggttatgttaatatagctgacaaa
ctgctaaaggagggtttggtcacatcctgcagtgctgaaaactctcatagtaaacatcaa
ggtaatggaggtgagaccaactgctgctgcacagaattgaaagtgcaacttgaaaagcat
aggcaagtcctactcttccttttaaacaagtttgggaatccagatggattcactgacatg
aaaaatctgttgaagcactaa
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