Ficedula albicollis (collared flycatcher): 101821428
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Entry
101821428 CDS
T02815
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101821428 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fab03009
]
101821428 (REXO1)
Ribosome biogenesis [BR:
fab03009
]
Eukaryotic type
Pre-60S particles
RNases
101821428 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
101821428
NCBI-ProteinID:
XP_005060040
UniProt:
U3KH32
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All DBs
Position
28:complement(1319245..1360581)
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AA seq
1180 aa
AA seq
DB search
MNKYLQCLLTPGTTERGYDPYNPELPRPLLEAEDGTLADITDVTPGILELELVNKAIEAV
KNEVEREQKKYEELLETTKEFGASEGSSLVSNTPVSAAGPQNDSFASLEYNPGSYNFSNN
SDYNPTPLAAAGRSSKYTLDSSRSKGSSLEYVPKAVAQNKKYSSTVTNNKYVIDDSKPST
DLEYDPLSNYSARLLGKATAKGSKRERASDYEDSYSPSQKKLCEDPDDDEVLARFSSSED
EAEVEYKTASGSSPSKAGSESESNHESSSKEQSTKVDSSASQESKEAAQHREDLPNSQKN
LAKNSPDKSSKAAKLCSGKSSKEIENKNKDCKDKTKKKKTDVSKTPSLSEAGKKEKNKNA
DKDKVLKKEEKLKTKNEDKNCKDKSVKVKTDGNLKKPEKQKSEKVEGCKKEKSKSSSSSS
GKSKSEGVTKGTEKVGSSKKDSQSKCDVKNGKESSARKNKEKGTKSSLEQRKDKASSAGQ
GEPRKGRKQRSLSHVDLFGDESGDEGDTGRPLSSLLGVSSDSDGADPASASDSDRDSTRK
AKRSKLSRSSSSSSTSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQP
SKEETNEEKTEDNLTTLFPGQKRRISHLVKQGNAEAPSKPVVRPYRPPTAQEVCYQRIQL
AQQQAAQLAGAVQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKATLGGRSVTPSNDS
EAPTLPLKPCTLAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRY
LNLFIDECLKFCPSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPAS
SSKTSNKKVVSHEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLREYLLTEEQLKE
NGYPLPHPEKPGRAVLFTAEEKKVTDSSCRICCRCGTEYMVSASGSCIRREECVHHWGRL
RKQRVPGGWETHYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTEGYPGIY
ALDCEMCYTKQGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSIT
LRDVQAVLLNMFSADTILIGHSLESDLFALKLIHSTVVDTAIVFPHRLGLPYKRALRTLM
ADYLKRIIQDNVEGHDSSEDARACMELMVWKIKEDAKVKR
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatacctgcagtgcttgttgaccccgggcaccacagagcgaggctatgacccc
tacaaccccgagcttcccaggcccttgctggaggcagaggatggcactctggctgacatt
acagatgtcacacctggcattctggagctggagctggtcaacaaggccattgaggcagtg
aagaacgaagtggagagggagcagaagaagtatgaggagctgctggaaaccacaaaggag
tttggtgcttcagagggctcctcactcgtttcaaacacacctgtgtcagctgctgggcct
cagaatgattcctttgcctccttggagtataatccagggagctacaacttcagcaataac
tcggactacaaccccactcctctggctgctgctggcaggtccagtaaatacactttggat
tcctcccgctccaaagggagctcgctggaatacgtccccaaggctgtagcacagaataaa
aaatacagcagcactgtcactaacaataaatacgtgattgatgactccaaaccttccaca
gacttggaatacgaccccctttccaattactctgccaggctgttgggcaaagccacagcc
aaggggtccaaaagggaaagggcctctgattatgaggactcttactctccatcacagaag
aagctctgcgaagatcccgatgatgacgaggtgttggccaggttctcctcctctgaagat
gaggctgaggtggaatataaaacagcttctggtagttcaccctcaaaagctggttctgag
agtgagtcaaaccatgagtcctccagcaaagagcagagcacaaaagtggatagctctgct
tcccaggagagcaaagaagcagcacagcacagggaggaccttccaaattcacagaaaaac
cttgccaagaactcaccagacaagagttcgaaagcagcaaagttgtgttctggtaagagc
agcaaggaaattgaaaataaaaacaaagactgcaaagacaaaacaaaaaagaagaaaacg
gatgttagtaaaacaccaagcctcagtgaggctgggaagaaggagaaaaataaaaatgca
gacaaagacaaagtgctcaagaaagaagaaaaattaaaaaccaagaatgaagataaaaac
tgcaaagacaaaagcgtcaaagtgaaaacagatgggaacttgaagaaacctgaaaaacag
aagtcagaaaaagtggaggggtgtaagaaagaaaaatccaagtccagcagcagcagttca
gggaaaagcaagagtgagggtgtcaccaagggcacagagaaggtggggagcagcaagaag
gactcccagagcaaatgtgatgtgaaaaatggcaaggaaagctctgctcgtaagaacaag
gagaaagggaccaagagctccctggagcaaaggaaggacaaggccagttctgcaggacag
ggagagccgaggaagggcaggaagcagcggagcttgagccacgtggacctgtttggggac
gagagcggggatgagggtgacacgggccggcctttgtcctccttactcggtgtcagctcg
gactcggacggggccgaccctgcctcggcctctgacagtgacagggacagcacgaggaaa
gcaaagcgctccaagctgtccaggtcatcgtcatcttcctcaacctctgatgacattgat
tattccatccttgagaaagatgtggactttgagtcagatcccatggaggagtgtctcagg
atctttaatgaatctaaagatgtgaaaactgaagacaagggaaggctggggaaacagcca
tccaaagaggaaacaaatgaagaaaagacagaagataatttaactaccttgtttcctggc
caaaaaagaaggatctctcatcttgtcaaacaaggaaatgcagaggccccgagcaagccg
gtggtgcggccctaccgtccccccacggcccaggaggtgtgctaccagaggatccagctg
gctcagcagcaggcagcacagctggctggggctgtgcaaaagacctctctctgtttgcca
ggagaaaagaggaggattgctcacgtgccaaatgcagccctcaccgcagcagccaagcaa
agcctcgggagcagcaaggcgactcttggtggcaggagtgtcacgccttccaatgactct
gaagcccccacccttcctctgaagccttgcaccttggctgggatggcttccaagaccacc
agcaccatcgtgcccaagagggtagcacatgttccctccttgcagagcaccactttacag
aggcctgttattcccacagagtttggtgctaaagtcccaaccaacattcgtcagaggtat
ctcaatctcttcattgatgagtgcctgaaattctgcccctcctcccaggaagccttcgac
aaggccctggcagaggagaaggtggcctatgagcgcagcaccagtcgcaacatttacctg
aacgtggccgtgaacacgctgaagaagctgcgcagcctcgtgcccaactccccggccagc
agcagcaagacaagtaacaagaaggtggtgtcccacgaagctgtgctgggagggaagctt
gctgccaagaccagctttactctgaaccgctcagggagcctgagagccgaggatctgaca
ggagctgccctgtaccggcgcctcagggagtacctgctgacggaggagcagctcaaggag
aacggctaccccctgccccaccccgagaagcctggccgtgctgtgctcttcactgcagag
gagaagaaagtcactgactcctcgtgcaggatctgctgtcgctgcggcaccgagtacatg
gtctcagcctcggggagctgcatccgcagggaggagtgtgtgcaccactgggggcgcctg
cgcaagcagagggtgccaggtgggtgggaaactcactacagctgctgctccggagctgtg
gggtcaccaggctgccaggttgctaaacaacacgtgcacgacgggcgcaaggagagcctg
gatggcttcgtgaagacttttgagaagctgcccacgactgaaggctaccctgggatctat
gccttagactgtgaaatgtgctacactaagcaagggctggagctgacgagagtaactgtg
atcaactcagagctgaaagtggtgtatgacacctttgtcaagccagactccaaggtggtg
gattacaacaccagattctcaggtgtgacagaagaggacctggagaacacgagcatcacc
ctgcgggatgtccaagccgtcctactgaacatgttcagtgcagacaccattttgataggg
cacagcttggaaagcgacttatttgcactaaagctgatccacagcaccgtggtggacacg
gccatcgtgttcccccaccgcctggggctgccctacaagcgcgccctgcgcacgctcatg
gccgactacctcaaacgcatcatccaggacaacgtggaaggacacgactccagtgaggat
gccagggcctgcatggagctcatggtgtggaagatcaaggaggatgccaaagtgaagcga
tga
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