Ficedula albicollis (collared flycatcher): 101821824
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Entry
101821824 CDS
T02815
Symbol
PUM3, KIAA0020
Name
(RefSeq) pumilio RNA binding family member 3
KO
K14844
pumilio homology domain family member 6
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101821824 (PUM3)
03009 Ribosome biogenesis [BR:
fab03009
]
101821824 (PUM3)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101821824 (PUM3)
Ribosome biogenesis [BR:
fab03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101821824 (PUM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
Arm-DNA-bind_2
Motif
Other DBs
NCBI-GeneID:
101821824
NCBI-ProteinID:
XP_005060878
UniProt:
U3K7F9
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All DBs
Position
Z:complement(27644183..27670650)
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AA seq
639 aa
AA seq
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MENKAKKKFVGKSGKGPRGKAPHWKRKFKKDNDSGPPKKVFNKGDEEGKPKSISKKFVKG
QLKPGKATVKQFKNKQQPEKFAKKRKLQDSEEGGSDSKKPKWDDFKKKRKELKQTRQIND
KSNYDIIVKSKQIWENMRRKKCDKEKREKLMNELQKLLHGKIKSLAFAHDSTRVIQCFIQ
YGSEKQRQETFEELKDSLVELSKSKYSRNIVKKFLMYGTKAQIAEIIKSFKGQVKKMLRH
SEASAVVEYAYNDKAILEQRNMLTEELYGNTFQVYKTPAVPTLDKVLEAQPEKKEAILDE
MKQILTPMAQKEAVIKHSLVHKVFLDFFTYALPKQRSEMIEAIREAVIYLAHTHDGARVA
MHCLWHGTPKDRKVIVKTMKTYVEKIATGEFSHLVLLAAFDCIDDTKLVKQLIISEIKTS
LPDIINNKYGKKVLLYLLSPRDPAHFVPEIITLLQQGDGNAYSKKNTELRRHELLEAISS
PLLEYLQEHTQEVVIDKATFVLVADILRTALGDIQPALDAIAKLAAEELVPGGRDGQLHI
AEHPAGHLVLKWLIEQDEKMKESGKEVCFGRTLVEHVGIENLKTWAEVNRGAIILCCLLR
SSDEMVVSTVKKGLKKLIPKLKRNRNVKGIEALLEKLTS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaaggcaaaaaagaagttcgtggggaagagtgggaaaggacctcgtggaaaa
gcgccgcactggaaaagaaaatttaaaaaggacaatgattcaggtccaccaaagaaggtc
ttcaacaaaggagatgaggaaggaaagcctaaatccatatccaagaaatttgttaaagga
cagttaaaacctggaaaagctactgtcaaacaattcaagaataaacagcaaccagaaaag
tttgcaaagaagagaaaactacaggatagtgaagagggaggatcagattctaagaagcca
aaatgggatgacttcaaaaagaaaaggaaagagttaaagcaaactagacaaattaatgat
aaaagtaattatgacataattgtaaaatcaaaacaaatatgggaaaacatgagaaggaag
aaatgtgataaggagaaacgagaaaagctgatgaatgaactacagaagcttcttcacggg
aaaattaagagtctggcatttgcacacgattcaacccgagtgatccagtgctttattcag
tatggtagtgagaagcaaaggcaagagacatttgaagaattgaaagatagcctagtagag
ctgagcaagtcaaaatattccagaaatattgtgaagaagtttcttatgtatgggacaaaa
gcacaaattgcagaaataataaaaagttttaaaggccaagtgaaaaaaatgctccgtcat
tccgaagcatctgctgtagtggaatatgcatataatgacaaagccattctggagcagagg
aatatgctgacagaagaactatatgggaacactttccaggtttacaagacaccagctgtc
ccaacactggataaagttctagaagctcaacctgaaaagaaagaggccatcttggatgaa
atgaagcagattcttacaccaatggcacaaaaagaggcggtgatcaaacactccctggta
cataaagtatttttggactttttcacttatgctcttccaaaacaaagatctgaaatgata
gaagctatcagagaggctgtcatctacctggcacacactcacgacggagcccgagtagca
atgcactgtttatggcatggcactcccaaggaccgaaaagtcattgtgaaaactatgaag
acgtatgttgaaaaaatagcaacgggtgaattttctcatctggtcttgctggcagctttt
gattgcattgatgatactaaacttgtgaagcagttaattatatcagaaataaagacttct
ttgcccgatataataaacaacaaatatggaaagaaggtcttgttgtacttgctgagtcct
agagatcctgcacattttgttccagaaatcatcacacttctgcaacagggagatggaaat
gcctatagtaagaagaacactgaactccgtcgccatgaacttctggaagccatttcctca
cctctgctggagtatttgcaagaacatacccaagaagtagtgatagacaaagctactttt
gtcttggttgctgatattttgagaacagctcttggtgacatccagcctgcactagatgca
attgctaagttggcagcagaagagctggttccagggggccgtgatggacagcttcacatt
gcagaacatccggcaggccatctagttttgaaatggttaatagagcaagatgaaaaaatg
aaggagagtggaaaagaagtttgctttggaagaacactggtggaacacgttggtattgag
aatctgaagacctgggcagaagtaaatcggggcgccattattctttgttgccttctccga
agcagtgatgaaatggtggtaagcacggtcaaaaaaggactaaaaaagctcatcccaaag
ctgaagcgcaatagaaatgtaaaagggatagaagcattactggagaaattgacttcctag
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