Ficedula albicollis (collared flycatcher): 101822014
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Entry
101822014 CDS
T02815
Symbol
RTEL1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fab03032
]
101822014 (RTEL1)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101822014 (RTEL1)
DNA replication proteins [BR:
fab03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101822014 (RTEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
SNF2-rel_dom
T4_Rnl1_C
Motif
Other DBs
NCBI-GeneID:
101822014
NCBI-ProteinID:
XP_005057321
UniProt:
U3JTN0
LinkDB
All DBs
Position
20:8228225..8278015
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AA seq
1254 aa
AA seq
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MPKITLNGITVDFPFQPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWR
EHFKDTISARKIVQRMNGAELFPDRPVSSWGTAATDGDVPTYYTDIPKIIYASRTHSQLT
QVINELKNTVYRPKICVLGSREQLCINPEVKRQEGNHMQIYMCRMKVMARACHFYNNVEE
KSTEKELIESIMDIEDLVKNGNKHRACPYYLSRSLKQQADIIFMPYNYLLDSKSRKSHNL
DLKGTVVILDEAHNVEKLCEESASFDLTPYDLASAVDAINVVLEEQAKVVQQNEINAEFN
MELTSSGLNMELEDIAKIKKILLQLESAIDAVELPANGSGVTKEGSYIFDLFAEAQITVQ
TKSSLLESLEQILQFLTGRTGIFINTSGLHKVSDVIQTVFSIDPPEGVATRYLPRQAVSK
YYKVHIHFDNGNQKKKQRTDLWNSSSSKRQGKTLSYWCFSPGYSMHELVQQGVRTIILTS
GTLSPLSSFTMEMQIPFPVCLENPHVIDKHQLWVGIIPKGPDGTVLTSTYERRFSEDYLS
SLGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDFAKRIEEVKPMFVEPRNKGSFS
EVIDAYYDKVTCPKSNGAAFLAVCRGKASEGLDFADINGRGVIITGLPFPPRMEPRVILK
MQFLDEMRRSGAGAQYLSGREWYSQQASRAVNQAIGRVIRHRQDYGAIFLCDHRFTTCDV
RGKLPSWVRPYVNVYDNFGHAVRSVSLFFRVAQEIMPPPLLQCPPGHTGSLSESSATPST
SSEQILSLQKAKNLDDHVPSLKRKRKVNGDGTPSLCVEYEQEFVSPRRKCVGLLDALEHS
EKSSEDAEEETDLPGEEQAHCLSTLSLQYEKRLTDEQKGGRKKIKLVSNTQERRAEPAEP
KKARAMFYIATVKDTLSQQNYELFSKALQQYKKTDDFHAMLSQMSSLFLEDEKKHILLRD
FYQFVRPQHKKQFDEACCNLTGVGCGYKPEHSLPREEREILAQRMEEKQSEQKSTFSKAS
CAQLNPGLHLNQGGSHLATGLNSAGQNASAAPRKEAEKAPGSRREHHQALRTAYLSDVQR
ALDKSSYSQFYEALLAYKKTDNYDAMVSVIAALTTERPQDFHLLQRFYMFVRPHHKEQFR
ELCKDLTGMVCGDGEKQLQQLEQNEVKPQSLESCAKGIGHVQDGAPFKSGVPEKIQSKIS
SFCFSQKSELELPKTEVSKKTSNVRAPTDSGVVPICPLEMEPEYGAEEVPQVLQ
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagatcactctgaatgggatcacagtggatttccccttccagccctacccatgc
caggaagcttacatggccaaggtgctggagtgcctgcaaaagaaggtgaatggcattttg
gagagccccacaggtacagggaagaccctttgcctgctgtgctccaccctggcctggcgg
gagcatttcaaggacaccatctccgcccggaaaatcgtgcagcgcatgaatggggcggag
ctctttcctgacagacctgtgtcctcctggggcactgctgccacagatggagatgtccca
acttattacactgacattccaaaaataatttatgcctccaggactcactcccagcttaca
caggtcattaatgagctaaagaacacagtgtacaggccaaagatttgtgtgctgggatcc
agggagcagctctgcatcaatcctgaagtgaagcgacaggagggcaaccacatgcagatc
tacatgtgccgaatgaaagtgatggctcgtgcttgtcatttctataacaatgtggaagaa
aagagtacagagaaagaactgatcgaatcaatcatggatattgaagacttggttaaaaat
ggaaacaagcacagagcttgtccttattatctctctcgaagcctgaagcagcaagcagac
attatttttatgccttacaactatttactagactcaaagagcaggaaatcgcacaacttg
gacctgaaggggactgtggtgatacttgatgaagctcacaatgtggagaagttgtgtgaa
gagtccgcttcttttgatttgactccctatgatttggcttcagcagtggatgcaataaat
gttgtcctggaggaacaagccaaggtggttcaacagaatgaaatcaatgctgaattcaac
atggagttgaccagttcaggtctgaacatggaactggaagatatagcaaagatcaagaaa
attcttcttcaacttgaaagtgctattgatgcagtggagctgccagcaaatggaagtgga
gtcaccaaagagggaagctacatctttgatctgtttgcagaggcccaaataacagtgcag
accaaatcctccctcttggagtcactggagcagattttacaatttcttacaggccgtact
ggaatatttatcaatacatctggattgcataaggtctcagatgttatccagacagtgttc
agcattgatcccccagaaggagtcgcaacaaggtacctgccacgtcaggcagtatctaaa
tattacaaggtacatattcattttgataatggtaatcagaaaaagaaacaaaggacagat
ctctggaattcatcatcttcaaaaagacaagggaagactttaagctattggtgtttcagc
cctgggtacagcatgcacgagctcgttcaacagggagtcaggacaatcatcctcaccagt
gggacactctcccccctctcttcatttaccatggaaatgcagatcccttttcctgtttgc
ctggaaaatcctcatgttattgataaacaccagctctgggttgggatcattccaaagggg
cctgatggaactgtgcttacttccacctatgaaagaaggttttcagaggattatttatct
tctctgggaaaaacaattggtaacctggtgcgagttgtgccacatgggctgttggtgttc
ttcccatcgtatcctgtcatggataagagcctggaatattggagagagcatgattttgcc
aaaagaatagaagaagtgaaaccgatgtttgtggaacccaggaataaaggaagcttttca
gaggttattgatgcctactatgataaagtcacctgtcctaagtccaatggagctgcattt
ttggcagtgtgtcggggcaaggctagtgaaggcttggactttgcagacataaatggacga
ggagtcatcattactgggcttccatttccccctcgtatggagcccagagtaattttaaag
atgcaattcctggatgagatgagaagaagtggtgcaggtgcacagtatctgtctgggcgt
gagtggtacagtcagcaggcgtcccgggctgtcaaccaggccatcggccgcgtcatcagg
caccgccaggactacggggccatcttcctgtgtgaccacaggttcacaacttgtgatgtc
agaggcaagctgccttcgtgggtccgtccctacgtgaacgtttatgacaactttgggcac
gcggtcagaagcgtgtccctcttcttccgtgttgctcaagaaattatgcccccacccctg
cttcagtgccctcctggacatactggttccctaagtgaaagcagtgcgacaccatctact
tcatctgagcaaatcctctctctgcaaaaagctaaaaacctggatgaccatgttccaagt
ttgaagaggaaaaggaaagtaaatggagatggaacacccagcttatgtgtggaatatgag
caagagtttgtctcaccccgaagaaaatgtgttgggctcttggatgccttggagcacagt
gagaagagcagtgaagatgcagaagaggaaactgatttgccaggagaggaacaggcacat
tgtttgtccacactttcccttcagtatgagaagagattaacagatgagcagaaaggagga
aggaagaaaataaaactagtcagcaatacacaggagcggagagcggagccggcggagccc
aagaaggcacgagccatgttttacattgccacggtgaaggacaccctgagccagcagaac
tacgagctcttctccaaggccctgcagcagtacaagaagacagatgacttccatgccatg
ctgtcccaaatgagctctctcttcttagaggatgaaaaaaagcacatcttgctgcgagat
ttttaccagtttgttcgaccccagcacaaaaagcagtttgatgaagcgtgctgcaatctg
actggagtgggctgtggctacaaacctgagcacagcctcccccgggaggagagggagatc
ctggcccagagaatggaagaaaaacaaagcgagcagaaaagtacgttctccaaggcttca
tgtgctcagctgaaccctgggctccacctgaaccaaggaggatcccacctggcaacagga
ctgaattctgcagggcagaatgccagtgcagctccaaggaaagaggctgaaaaggctcca
ggctccaggagagagcatcaccaggccctcaggactgcctatctcagtgatgtgcagagg
gctttggacaaaagcagctacagccagttctatgaggctctgctggcttacaagaagaca
gataactacgatgccatggtgtcagtgatagcagccctcaccactgagaggccacaggac
tttcatctcctgcaaaggttttatatgttcgtgcgtcctcaccacaaagagcagttcaga
gagctatgtaaggatttgactggaatggtctgtggtgatggagagaagcaactgcaacaa
ttggagcagaatgaagtgaaaccccagagcttggagagctgtgcaaaaggaattggccac
gtacaagatggagccccttttaagagtggggtaccagaaaaaattcagagtaagatttcc
tccttctgctttagccagaaaagtgaacttgagttgccaaagactgaagtgtccaaaaaa
accagtaatgtgagagcacccacagactctggagttgtacccatctgtcccctagagatg
gaaccagagtatggtgctgaagaagtgccccaagtgctgcagtga
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