Ficedula albicollis (collared flycatcher): 101822017
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Entry
101822017 CDS
T02815
Symbol
POLRMT
Name
(RefSeq) RNA polymerase mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
fab03029
]
101822017 (POLRMT)
Enzymes [BR:
fab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101822017 (POLRMT)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
101822017 (POLRMT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Motif
Other DBs
NCBI-GeneID:
101822017
NCBI-ProteinID:
XP_005060140
UniProt:
A0A803VZM2
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Position
28:complement(3175840..3191994)
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AA seq
1215 aa
AA seq
DB search
MSLLRLRAVLRGPGGLRGPGIAWRIFRSYSSASTKEKANRNGICERTELLEVLKARAKQL
QGSNVPQVTVSKVELDAVDNDKYQEAVDPGPKEKQPRARGDGLARSSSWATKLQKEMYIQ
QLKMKQELPSAASQLALEGQAKLDVKAEAKAKAKTMKSPKISWNQSSGSPHSKPRVVEAK
GGAGLKKPQRMPKDKSNQQALQQTVQCNLECFLFLQQPEEAERYLLLCQSSPVKSKVLDI
GAYNIVMRSWARKGNLNRIDRLFSILESTSLQPNLDSFAVALECMGRSQSPPKAILRYLQ
QLNSSGFHVDELFQKCLFEGDEKEMVLWAIRAVQPNYQLPPPPSPDISKSSLLQDFYSRE
TMVPYPKLDFSMKELQERFQQQLEMELKNTITIESVEAAKPLTPQAVKARELLGTLRSQW
HDAILQALQNSKRSMVRPKRLSKYSVLYPYLCLLPDEDYVDIMLQILNDLSPQGESLAVL
ARELGSKVYDRYIIQRKLRSCQLEKVQKIYENYIELLAKDSQPKQYLPREYWEKLVAEAG
FGPSLSLKGCSWPCVLLMRLGMHMLELLVKAVKVPRNILNHRLESKPIPVLYHVYSFYSN
WQVGLIKPHPIFSQIVSNAAETTLTFNSSAMPMLCPPVPWTSPSFGAFVLSDTKLMRFMD
ESTHHQLLLEQCPLVNLHPVLDALNQLGNCAWKINQPVLDIIISIFNDKGDEKLDIPPPL
SEAPKPPTAPGNSSTWSKTLKHELFLCKKKTAEMHSLRMDALYKLSIANYVRDKVFWFPH
NMDFRGRTYPCPPYFNHLGNDVTRAILLFAEGRPLGPRGLDWLKIHLINLTGLKKKNALQ
ERLEYANEIMEDILDSADHPLTGRKWWMDTDEPWQALACCMEIAKASRSPDPAAYISHFP
VHQDGSCNGLQHYAALGRDLSGAASVNLVPCGLPQDVYSAVAQQVEEFRRKDAERGLKIA
QVLQGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDEFPEEYLWEASHYLVKQVFN
SIKEMFSATRDIQNWLTESAKLIAQSGRTVEWVVSLGLPIMQPYYRSRSTVLNCGMQRLS
VKNSNSSQKPDTVKQKNAFPPNFIHSLDSTHMMLTALHCLRKGLTFVSVHDCYWTHALTV
DVMNQVCRQQFVALHSEKILQDLSEFMLEKYCSSSSSSTEPIAHWQKRLMEQLSNVPRTG
EFNLKQVMDSTYFFS
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgaggctgcgggcggtgctgaggggcccgggcgggctcagggggcccggg
attgcgtggagaatcttcaggagctactcttctgccagcaccaaggagaaggcgaacaga
aatggcatctgtgaaagaacagagctgctggaagtgctcaaagctcgagcaaagcagctc
caaggcagtaacgtcccacaggtgacagtcagcaaagtggaactggatgcagtggacaat
gacaaataccaggaggctgtggaccctggccccaaggagaagcagcccagggcacggggt
gatggcctggcccggtccagcagctgggccacaaagttgcagaaggagatgtacatccag
cagctgaagatgaagcaggagttacccagtgctgcctcccagctagctctggagggccag
gccaagctagatgtcaaagcagaggccaaagccaaagcaaaaaccatgaagagcccgaag
atatcctggaaccagagctctggcagcccccacagcaagcccagggtggtggaagcgaag
ggaggtgcggggctgaagaaacctcagaggatgccaaaggacaagagtaaccagcaggcc
ctgcagcagacagtccagtgcaacctggagtgcttcctgttcctgcagcagcccgaggag
gccgagcgctacctcctgctgtgccagagctctccggtgaagagcaaggtgctggacatc
ggtgcctacaacatcgtgatgcgcagctgggccaggaagggcaacttgaatcgcattgac
cgtttgttttccatcctggagtccaccagcctccagcccaatctggactcctttgcagtg
gccctggagtgcatgggccggagccagtctcctcccaaagccatcttgagatatctgcag
cagctgaacagcagtggcttccatgtggatgagctcttccaaaagtgcctgtttgaggga
gatgagaaggagatggtgctgtgggccatcagggctgtccagcccaactaccagctgcct
cctccacccagccccgacatttccaagtcttctctgctccaggacttctattccagagag
acgatggtgccgtaccccaagctggatttctccatgaaggagttgcaggagcgcttccag
cagcagctggagatggagctgaagaacaccataaccattgagtcagtggaggcagccaag
cccctgaccccacaggctgtcaaagcgcgtgagctgctgggcaccctgcgctcccagtgg
cacgatgccatcctccaggccctgcagaattccaagcgcagcatggtccggcccaagagg
ctgtcaaagtacagtgtcctctacccctacctgtgcctgctgccagatgaggactacgtg
gacatcatgctgcagatcctcaatgatctgtctccacaaggtgagtccctggcagtcctg
gccagggagctgggctccaaagtctatgacaggtacatcatccagaggaagctgcgcagc
tgccagctggagaaggtgcagaagatctatgagaactacatcgagctgctggcaaaggac
agccagcccaaacagtacttgccacgggaatactgggagaagctggtggcagaagcaggc
tttgggccttccctgagcttgaagggctgcagctggccttgtgtgctcctcatgcgcctg
ggcatgcacatgctggagctcctggtgaaggctgtcaaggtgcccaggaacatcctcaat
catcgcctggagtccaagcctatccctgtcctctaccatgtctactccttctacagtaac
tggcaggtagggctgataaagccccatcccatcttctcccagattgtgtcaaacgctgca
gagaccacactgaccttcaactcctctgccatgcccatgctgtgccccccggtgccctgg
acctcccccagtttcggtgcctttgtcctcagtgacaccaagctgatgcgcttcatggat
gagagcacccaccaccagctgctcctggagcagtgtcccctggtgaacctccaccctgtg
ctggatgccctgaaccaactgggcaactgtgcctggaagatcaaccagccagtgctggat
attatcatctccattttcaatgacaaaggagatgagaagctggacatcccaccacccctc
tctgaggctcccaagcctcccactgctcctggcaattcctccacctggagcaagaccctc
aagcacgagctgttcctgtgcaagaagaagactgcggagatgcacagcctgcgcatggac
gcgctctacaagctctccatcgccaactacgtcagggacaaagtgttctggttcccccac
aacatggatttccgaggcaggacttacccgtgcccgccctatttcaaccacctgggcaac
gatgtcacccgggccatcctgctgtttgcagaggggaggccgctggggcccaggggactc
gactggctgaagatccacctcatcaacctgacggggctgaagaagaagaacgccttgcag
gagcggctggagtatgccaatgaaatcatggaggacatcctggactcggctgaccacccg
ctcacgggcaggaagtggtggatggacacagacgagccctggcaagccttggcgtgctgt
atggaaatcgccaaagcctcgaggtctccagatccagcagcctacatctctcacttccca
gttcaccaggatggctcctgcaatgggctgcagcactacgcagcgctcggccgggacctc
agcggcgctgcctccgtcaacctggtgccctgtgggctccctcaggatgtctacagtgca
gtggcccagcaggtggaggagtttcggaggaaggatgctgagcgggggttgaagattgcc
caggtgctgcagggcttcatcagccgcaaggtggtgaagcagacggtgatgacggtggtg
tacggggtcacgcgctacggcggccgcctgcagatagagaaacgcctcaaggagatcgac
gagttccctgaggagtacttgtgggaagcttctcattatctggtgaagcaggtgttcaac
agcatcaaggagatgttctcagcaactcgagatatccagaactggctgacagagagtgcc
aagctcattgcccagtcaggccggacggtggagtgggtcgtctcgctggggctccccatc
atgcagccctactatcgctccaggtccactgtgctgaattgtggcatgcagcgtttgagt
gtgaaaaactccaacagcagccagaaacctgacactgtgaagcagaagaatgcctttccc
cccaacttcatccactctctggactccacacacatgatgctcacagcactgcactgcctc
aggaagggcctgaccttcgtctcagtgcatgattgctactggacccacgcgctcaccgtg
gatgtcatgaaccaggtctgtcggcagcagttcgtggctctgcacagtgagaagattctg
caggatctgtctgagttcatgctggagaagtactgcagttcatccagctccagcacagag
cctatagcccattggcagaagagactgatggagcagctgtcaaatgttcccaggacaggt
gaattcaacctgaagcaagtgatggattccacatatttcttcagctga
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