Ficedula albicollis (collared flycatcher): 101822024
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Entry
101822024 CDS
T02815
Symbol
SPTBN4
Name
(RefSeq) spectrin beta, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04517
IgSF CAM signaling
fab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101822024 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101822024 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fab04812
]
101822024 (SPTBN4)
Cytoskeleton proteins [BR:
fab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101822024 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
101822024 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CH_2
COG5_N
Motif
Other DBs
NCBI-GeneID:
101822024
NCBI-ProteinID:
XP_016160407
LinkDB
All DBs
Position
LG35:<157030..203225
Genome browser
AA seq
2341 aa
AA seq
DB search
VVLGSQDGFGVVLGCFWAGFGVTSLSPDERDAVQKKTFTKWVNAHLARAACRVGDLYSDL
RDGFVLTRLLEVLSGETLPRPTRGRMRIHSLENVDKALQFLKEQRVHLENVGSHDIVDGN
HRLTLGLIWTIILRFQIQVIKIKTEDNRETRSAKDALLLWCQMKTAGYPEVNIQNFTTSW
RDGLAFNALIHRHRPDLIDFHKLTKSNATYNLQQAFNTAEQHLGLSKLLDPEDVNMEDPD
EKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQVMEIAAITARYEALAAELLAWIQHTI
AIIANQKFANSLSGVQQQLQAFTAFCRLPTGARFQEKGNLEVLLFTIQSKLRATNRKLYV
PSEGKSISDINKAWSCLEKAEHEREVALRNELIRQEKLELLAQRFDHKAVMRETWLNENQ
RLVSQDNFGYDLPAVEAAMKKHEAIEADISSYQERIQVVVELALEVESEGYYDTRRIGAQ
KDNILRQWALLTELVRARRARLEQNLALQKIFQEMVYMIDWMEEMQVLLVSKDLGKHLLE
VEDLLQKHGLLEADIAAQTERVQALNAAALKFSELAGYQPCDPQIICNRVNHVQTCLEEL
EELAAKRRKELEDSRQLWTFFQEMEEAEAWIREKEKILAAKSCGRDLSSVVTLTNKHKTM
LGELGNRRALLHQTMKKGEKILAKKSFGSVGIQEKMREVCLRWKKLEEVTGLHQQRLEDA
MNFFQFSAETDDLVAWLQDMYRIVSSDDFGHDDYSSQALLRKHRAVVDEVEKHRGAVMSL
RKQLALLAPDHRQGVDVQIRVVEVEQLYGEVAEVAVLRTQWLQDALAVYRMFSEVHACEV
WVDEKEQWLEKMEVPEELDEVEVVQHRFESLDQEMNSVMGRILDVNQVVQQLVEGGHPSS
DEVRSCQDHLNSRWNRVVELVETKKRRLSSVLKIQNFLLECGEMKAQVREKRKAVEATRS
GGGGDLGGVLALQRRLSTVEAALAVLEPRLVELQQEGEALAAAHPERALEILLPFEEIGE
EWDDLKRALQGCEDTLTVAGRLQQFIQDLDNFLGWLVKTQAAVGSEEVPESLEEAERLLN
VHVALKEEINGYEEDYAKIQAASELLALEEMDVPYLSLQQWLQKLEAGWGKLLQSWEMRR
EVLVQSHIFQLFLRDVRQCQNSLCNQESILVHAELPDSVEGVTKALKEHQDFTTTLELSL
QKVQQVLQAGESLRRQQNLHGERVAEAVAGLRDRSQRNQQLAQERARRLRDQLELQRFLQ
ESREVRPQIGWDPKNQLGHPKKWGVPPWPQTPPDEFWSPNLPPKLLLGPTFYFKPLILNF
GVPLCPQTACDKFRGPPFTPKLQEGEELVQAKPELSGAVRRQLEELRRCWQELESTSQAR
SRRLRLEEQLETVGSGADLRSVSRQLKRLQTMESQVEEWYKEVGELQAQAAALPAQAAGR
DAKWGWDGRGHSHDAELHPHPQMWVQDRLPLAMLKDHGTNLQTVQQFIKKNQNLRREIQV
HRPRVDEVLERAAAVATIKSPEAEGVRCLLERLGTMWAELQEQTERRQQTLDATYQLEQY
YFDVAEVESWLGEQELLLMNEEKGKDEQSTLQLLKKHLLTEQTIENYEETIAQLSRQCRR
LTAAVSLPSEQVSRRQSQVDRLYVSLKDLVEERKVKLEQQYWLYQLNREVDELEHWIAEK
EVVAGSPELGQDFEHVTLLQEKFLEFASETGSVGQERIAAVNQMVDELIDYGHTDAATIA
EWKDGVNEAWADLLELMETRAQMLAASHELHKFFNDCKEVLGQIEEKRQRLPPPPPPPPP
TSAGALQRALGAFEHDVEVLVTQVRQLQEGAAQLRTLYAGDNAEAIAGREQEVLRAWKEL
LAACEECRLHVASVADKIRFVGTVRDLLAWMDGVLHQMGAGEKPRDVSSVELLMNDHQSL
KTEMEARAKNVATCLELGKTLILSKSPAADEVPGRGAALAVPAVREVHQFAQEAVVADAW
LTAQEPLLKSQELGSSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTIEKLKAEQNKQ
PPTPLLTRKFLGEPPGGADPRRPEPRVAYVRHELRPERLQPKLDRIQTPTTEGGPSEPPP
ATATITTATPAEPPVAPKAEEPGEVRSVLPERRRERRERRLERQESSEPELPRHDGKGGG
SKATLADIVEQLQEKEAGGPVPASPRDRDSPPPPPPAQGSAPPPPPPAHTVTHEGFLLRK
HELDGAGKKASNRSWVNLYCVLAKGDLGFYKDAKGPAAGATHAGAPRNYKKKKNVFKLKT
GDGSEFLLQAKDEEDMQGWLRALAASAQEHAELARWQQGLLTTSSTDEGLPRRDPDRPRR
K
NT seq
7026 nt
NT seq
+upstream
nt +downstream
nt
gtggttttggggtctcaggatggatttggggtggttttgggctgtttttgggctggattc
ggggtgacctcgctgtccccagacgagcgggacgcggtgcagaagaaaaccttcaccaag
tgggtgaacgcgcacctggcgcgcgccgcctgccgcgtcggcgacctctactccgacctg
cgcgacggcttcgtgctgacgcggctgctggaggtgctctcgggggagaccctgccgcgc
cccacgcggggccgcatgcgcatccactctctggagaacgtggacaaggcactgcagttc
ctcaaggagcagcgcgtgcacctggagaacgtcggctcgcacgacatcgtggacggcaac
caccgcctgacgctgggcctcatctggaccatcatcctgcgcttccagatccaggtgatc
aagatcaagaccgaggacaaccgcgagacgcgctcggccaaggacgcgctgctgctctgg
tgccagatgaagacggcgggctatcccgaggtcaacatccagaacttcaccaccagctgg
agggatggcctggccttcaacgccctcatccaccggcaccggccggacctgatcgacttc
cacaagctgaccaagtccaacgccacctacaacctgcagcaggcgttcaacacggccgag
cagcacctggggctcagcaagctgctggaccccgaggatgtgaacatggaggaccccgat
gagaagtccatcatcacctacgtcgtctccttctaccactacttctccaagatgaaggcg
ctggccgtggaggggaagcgcatcggcaaggtgctggaccaggtgatggagatcgcggcc
atcacggcgcgctacgaggcgctggcggccgagctgctggcctggatccagcacaccatc
gccatcatcgccaaccagaagttcgccaactcgctgagcggcgtccagcagcagctgcag
gccttcaccgccttctgtcgcctccccaccggtgccaggttccaggagaagggcaacctg
gaggtgctgctcttcaccatccagagcaaactccgcgccaccaaccgcaagctctacgtg
cccagcgagggcaagagcatctccgacatcaacaaggcctggagctgcctggagaaggcg
gagcacgagcgggaggtggctctgaggaacgagctgatccggcaggagaagctggagctg
ctggcccagcgcttcgaccacaaggccgtcatgagggagacgtggctcaacgagaaccag
cgcctggtctcgcaggacaacttcggctacgacctgccggcggtggaggcagccatgaag
aagcacgaggccatcgaggccgacatctcctcgtaccaggagcgcatccaggtggtggtg
gagctggcgctggaggtggagtccgagggctactacgacacgcggcgcatcggcgcccag
aaggacaacatcctgcggcagtgggcgctgctgaccgagctggtgcgcgcccgccgcgcc
cgcctggagcagaacctggcgctgcagaagatcttccaagagatggtctacatgatcgac
tggatggaggagatgcaggttcttctggtctccaaggatttggggaagcatctgctggag
gtggaggatctgctgcagaagcacgggctgctggaggccgacatcgcggcacagaccgag
cgcgtccaggcgctcaacgctgcggcgctcaagttctcggagctggcaggctaccaaccc
tgcgacccccagatcatctgcaaccgcgtcaaccacgtccagacgtgcctggaggagctg
gaggagctggcggccaagaggaggaaggagctggaggattcccgccagctctggaccttc
ttccaggagatggaggaggccgaggcctggatccgcgagaaggagaagatcctggccgcc
aagagctgcggccgcgacctcagcagcgtcgtcaccttgaccaacaagcacaaaaccatg
ctgggcgagctgggcaaccgccgggcgctgctgcaccaaaccatgaagaaaggcgagaag
atcctggccaagaaatctttcggctccgtgggcatccaggagaagatgcgggaagtttgc
ctgcgctggaagaagctggaggaggtcaccggcctccaccagcagcgcctggaggacgcc
atgaacttcttccagttcagcgccgagacggacgatctggtggcctggctgcaggacatg
taccgcatcgtgtccagcgacgatttcggccacgacgattactccagccaggcgctgctg
cgcaagcaccgcgccgtggtggacgaggtggagaagcaccgcggcgccgtgatgtcgctg
cggaagcagctggcgctgctggcccccgaccaccggcagggcgtggacgtgcagatccgc
gtggtggaggtggagcagctctacggcgaggtggccgaggtggccgtgctgaggacgcag
tggctgcaggacgcgctggccgtttaccgcatgttcagcgaggtgcacgcctgcgaggtg
tgggtggacgagaaggagcagtggttggagaagatggaggtgcccgaggagctggatgag
gtggaggttgtccagcacaggtttgagagtctggaccaggagatgaacagcgtcatgggg
cgaatcctggacgtcaaccaggtggtgcagcagctggtggagggcggccaccccagctcg
gacgaggtgcggtcctgccaggaccatctcaacagccgctggaaccgcgtggtggagctg
gtggagaccaagaagcgccggctcagctcggtgctgaagatccagaacttcctgctggag
tgcggcgagatgaaggcgcaggtgcgcgagaagcgcaaagccgtcgaggccacgcgcagc
ggcggcggcggcgacctgggcggcgtcctggcgctccagcgccgcctctccaccgtggaa
gccgctttggccgtgctggagccgcgtttggtggagctccagcaggaaggagaagctttg
gccgccgcccaccccgagcgcgccctggagatcctgctgcccttcgaggagatcggcgag
gagtgggacgacctcaagagagccctccaagggtgtgaggacaccttgacggtcgccggg
cgcctccagcagttcatccaagatctggacaactttttggggtggttggtgaagacccaa
gcggccgtggggtccgaggaggtgcccgagagcttggaggaggcggagaggctgctgaac
gtgcacgtggcgctcaaggaggagatcaacggctacgaggaggactacgccaagatccag
gcggccagcgagctgctggccctggaggagatggacgtgccctacctgtcgctgcagcag
tggctgcagaagctggaggcgggctgggggaagctgctgcagagctgggagatgaggagg
gaggtgctggtgcagtcccacatcttccagctcttcctgcgggatgtgcggcagtgccag
aacagcctctgcaaccaggagtccatcctggtgcacgctgagctgccggactcggtggag
ggcgtcaccaaggcgctgaaggagcaccaggacttcaccaccacgctggagctgagcctg
cagaaggtgcagcaggtgctgcaggccggcgagagcctgcgacggcagcagaacctgcac
ggcgagcgcgtggccgaggccgtggcagggctcagggacaggagccagcggaaccagcag
ctggcccaggagcgggcgcggcggctccgggatcagctggagctgcagcggttcctgcag
gagagccgcgaggtgagaccccaaatcggctgggaccccaaaaaccagctgggacacccc
aaaaaatggggggtcccaccttggccacaaacccctcctgatgaattttggagtcctaat
ttgccccccaaactcctcctgggtcccaccttttacttcaaacccctcatactaaatttt
ggggtccccctttgcccccaaaccgcttgtgacaaatttcggggtccccccttcaccccc
aaactgcaggagggcgaggagctggtgcaggccaagccggagctgagcggggcggtgcgg
cggcagctggaggagctgcggagatgctggcaggagctggagagcacgagccaggcgcgg
agccggcgcctgcggctggaggagcagctggagaccgtgggcagcggggccgacctccgc
agcgtcagccgccagctcaagaggctgcagacgatggagtcgcaggtggaggagtggtac
aaggaggtgggcgagctgcaggcgcaggcggcggcgctgccggcgcaggcagccgggcgg
gacgcgaaatggggatgggatgggagggggcacagccatgacgccgagctccacccccat
ccccagatgtgggtccaggaccgcctgcccttggccatgctgaaggaccacggcaccaac
ctccagaccgtccagcagttcatcaagaagaaccagaacctgcgccgggagatccaggtg
caccggccccgtgtggacgaggtgctggaacgcgccgccgctgtcgccaccatcaagagc
cctgaggccgagggcgtgcggtgcctcctggagcgcttggggacgatgtgggcagagctg
caggagcaaacggagcgccggcagcagaccctggatgccacttaccagctggagcagtac
tactttgacgtggccgaggtggagtcgtggctgggagaacaagagctgctcctgatgaac
gaggagaaggggaaggacgaacagagcaccctccaactcctcaagaaacacctcctcacc
gaacaaaccatcgagaactacgaggagaccatcgcccaactctcccgccagtgccgccgg
ctgacggccgctgtgtccttgcccagcgaacaggtcagcaggcggcagtcgcaggttgac
cggctgtacgtgtctctgaaggacctggtggaggagcgcaaggtcaagctggagcagcag
tactggctctaccagctcaaccgcgaggtggacgagctggagcactggatcgccgagaag
gaggtggtggccggctcgcccgagctggggcaggacttcgagcacgtcacgctgctgcag
gagaagttcctggagttcgccagcgagacgggcagcgtgggccaggagcgcatcgccgcc
gtcaaccagatggtggacgagctcatcgactacggccacaccgacgccgccaccatcgcc
gagtggaaggacggcgtcaacgaggcctgggccgacctcctggagctgatggagacgcgc
gcccagatgctggcggcgtcccacgagctgcacaagttcttcaacgactgcaaggaggtg
ctggggcagatcgaggagaagcggcagcgcctcccccccccccccccccccccccccccc
acctcggccggcgctctgcagagagccctgggcgccttcgagcacgacgtggaggtgctg
gtgacgcaggtgcggcagctgcaggagggcgcggcgcagctgcggacgctctacgccggc
gacaacgccgaggccatcgccgggcgcgagcaggaggtgctgcgggcgtggaaggagctg
ctggcggcgtgcgaggagtgccggctgcacgtggccagcgtggccgacaagatccgcttc
gtgggcactgtcagggatctgctggcgtggatggatggggtgctgcaccagatgggcgcc
ggggagaagcccagggatgtgtcctcggtggagctgctgatgaacgaccaccagagcctc
aagaccgagatggaggcccgggccaagaacgtggccacctgcctggagctgggcaagacc
ctgatcctcagcaagagcccggcggccgacgaggtgccagggaggggggcggccctggct
gtgccggcagtgcgcgaggtgcaccagttcgcgcaggaggctgtggtggccgacgcgtgg
ctgacggcccaggagccgctgctcaagagccaggagctgggcagcagcgtggacgaggtg
gagcagctgatccggcggcacgaggcgttccggaaggcggcggcagcttgggaggagagg
ttcagctccctgcggcgcctcaccacgatcgagaagctcaaggccgagcagaacaagcag
ccgccgacgccgctcctgacccgcaaatttttgggggaacccccgggaggtgccgaccct
cgccggccagagccgcgcgtcgcctacgtccggcacgagctgcggccagagcgcctccag
cccaagcttgaccgcatccagactccgaccactgagggaggaccctctgagccacccccg
gccaccgccaccatcaccacggccacccccgctgagcccccggtggcccccaaggccgag
gagcccggtgaggtccggtcggtgctgccagagcggcgccgggagcgccgggagcgccgg
ttggagcgccaggagtccagcgagccggagctgccgcggcacgacgggaagggcggcggc
agcaaagccaccctggcggacatcgtggagcagctgcaggagaaggaggcgggcgggccc
gtgccggcttcgccccgtgaccgcgactcccccccccccccccccccggcacagggcagc
gcgccgccgccgccgccccccgcgcacacggtgacgcacgaggggttcctgctgcgcaag
cacgagctcgacggcgccggcaagaaggcgtccaacaggtcctgggtgaacctctactgc
gtgctggccaagggcgacctgggcttctacaaggacgccaagggcccggcggccggcgcc
acgcacgccggcgcgccgcgcaactacaagaagaagaaaaacgtcttcaagctcaagacc
ggcgacgggagcgagttcctgctgcaggccaaggacgaggaggacatgcagggctggctg
cgggctctggccgccagcgcccaggaacacgccgagctggcccggtggcagcagggcctc
ctcaccacctcctccactgacgaggggctcccgcggcgcgaccccgaccggccccgacgg
aagtga
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