Ficedula albicollis (collared flycatcher): 101822078
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Entry
101822078 CDS
T02815
Symbol
DSCAML1
Name
(RefSeq) DS cell adhesion molecule like 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
101822078 (DSCAML1)
Cell adhesion molecules [BR:
fab04515
]
Immunoglobulin superfamily
DSCAM family
101822078 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
101822078
NCBI-ProteinID:
XP_016159304
LinkDB
All DBs
Position
24:complement(1095613..1187291)
Genome browser
AA seq
1879 aa
AA seq
DB search
MRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGGLYISDVQKEDALSTY
RCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGRLVELPCIASGYPNPA
IASGYPNPAVRWIKDGRPLPADSRWSKRITGLTISDLRVEDSGTYICEVTNTFGSAEVTG
TLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVAVDDYISIRGIS
NETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNPGEQFSL
MCAAKGAPPPTVTWALDDEPIPRDSGHRSNQYTMSDGTTVSHMNVTGPQIKDGGVYRCTA
RNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKDSLLLPD
NHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQPFEFPPA
SIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSLKHNGNY
TCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAK
GSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKI
PAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITTKDNGDE
VISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRW
TQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNK
IGRSEPSKELTISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRGYQIGYR
ENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLE
DVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGEMQNITT
TRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVPSSASSV
VVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQYLLWVAA
VTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAIKWTKDS
EDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQVPPDQP
RLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLESLKC
GTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWSSGG
CPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGNETTQFA
TLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRLKRLRDA
KSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDT
EFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQ
WTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASST
YEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTPSEPGIC
RFTASPPKPQDSERGKGVAVPIPHRASKSDYCNLPLYVKSEAFFRKPDAHEPCPVVPPRE
ASIRNLARAYHAQARHMTLEPGAKPLGLPPPASAATTLPQRTLPMPGPAGPAPAPMSTSG
VGRSQKQGAGAYSKSYTLV
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaaacgtggctgttttcaagtgcctcatcccctcttcagtgcaggaatatgtt
agtgttgtatcctgggagaaagacaccgtttctatcatcccagaaaataggttttttatt
acttcttatggaggtttgtacatatcggacgtgcagaaggaagatgccttgtccacctac
aggtgtatcaccaagcacaagtacagcggggagacgcggcagagcaacggcgcccggctc
tccgtctcagacccggcagagtccatccccacgatgttagacagcttccagtcccgggag
gtgaaggcgggccggctggtggagctgccctgcattgcctcgggctaccccaacccggcc
atcgcctcgggctaccccaacccggccgtgcggtggatcaaggacgggcggccgctcccc
gccgacagccgctggagcaagcgcatcacggggctgaccatcagcgacctgcgcgtggag
gacagcggcacctacatctgcgaggtgaccaacaccttcggctccgcagaggtcacgggg
accctcacggtcatagaccctctgcgtgtgaccctcacaccaaagaagctcaaaacaggc
atcggcagcaccgtcatcctctcttgtgccctcagcggctcccccgagtacgtcatccgc
tggtaccgcaacacggacctggtggcggtggatgattacatctccatccgcggcatcagc
aacgagaccctcctcatcacggccgcccagaagagccactccggcgcctaccagtgcttt
gccacccgcaagtcccagacggcacaggacttctccatcatcacgctggaggatgggacc
ccccgcatcgtctcctccttcagcgagaaggtggtcaaccccggggagcagttctccctg
atgtgtgccgccaagggggccccgccacccaccgtcacctgggcgctggacgacgagccc
atcccgcgggacagcgggcaccgctccaaccagtacaccatgtctgatggcaccaccgtc
agccacatgaacgtgaccggcccgcagatcaaggacggcggcgtgtaccggtgcaccgcg
cggaactcggtgggcagcgccgaataccaagcgcgaataaacgtaagagggcccccgagc
atccgcgccatgaagaacattacagcggtcgcgggtagggacactttcatcaactgcagg
gtcatcgggtacccctattactccatcaagtggtacaaggactctctgctgctgcccgat
aaccaccgccaagtggtctttgagaacggcaccctgaagctgatggatgtgcagaagggc
atggatgaaggagagtacctgtgcagcgtgctgatccagccccagctctccatcagccag
agcgtccacgtcaccgtcaaagtccctccgctgatccagcccttcgagttcccgccagcc
tccatcgggcagctcctctacatcccctgcgtggtctcctccggggacatgcccatccac
atcacctggaggaaggacgggcacgtcatcctctctggctctggggtcaccatcgagagc
aaggagttcatgagctccctgcagatctccagcgtctccctcaagcacaacgggaactac
acctgcatcgccagcaacgacgcggccaccgtcagccgggagcggcagctgatcgtgcgg
gtgcctcctcgtttcgtggtccaacccaacaaccaggatggcatttatggaaaagctggg
gtgctgaactgctctgttgatgggtacccccctccaaaagtcatgtggaagcacgctaaa
ggaagtggcaacccccagcagtaccaccccatccccctgacaggccgcatccagatcctg
cccaacagctccctgctcatccgccacgtgctggaggaggacatcggctactacctctgc
caggccagcaacggcgtgggcacggacatcagcaagtccatgttcctcactgtcaagatc
ccagccatgatcacctcccaccccaacaccaccattgccatcaagggccagaccaaggag
ctgaactgcacagcgcggggcgagcggcccatcatcatccgctgggaaaagggggacacg
gtcatcgaccccgaccgcaacatgcgctacgccatcaccaccaaggacaacggcgacgag
gtcatctccaccctcaagctgaaacctgccgaccgcggggactccgtcttcttctcctgt
cacgccatcaactcctacggcgaggacagaggcttgatccagctcactgtccaagagccc
cctgaccctccggagctggagatccgtgaggtgaaagcccgcagtatgaatttgcgatgg
acacagcggttcgacggcaacagcatcatcaccgggttcgatatcgagtacaagaacaag
tcagattcctgggattttaagcagtctacacgcaacatctccccgaccatcaaccaggcg
aacatcgtggacctgcaccccgcctcggtgtacagcatccgcatgtactccttcaacaag
atcgggcgcagcgagcccagcaaggagctcaccatcagcaccgaggaagcagctcccgat
ggccctccgatggatgtcaccttgcagccgatcacgtcccagagcatccaggtcacctgg
aaggccccgaagaaggagctgcagaacggggtgatccgtggctaccagattggctaccgg
gagaacagcccaggcagcaacgggcagtacagcatcgtggagatgaaggccacgggcgac
agcgaggtctacacgctggacaacctcaagaagttcgcgcagtacggggtggtggtgcag
gcgttcaaccgcgcgggcacggggccctcgtccagcgagatcaacgccaccacgctggag
gacgttcccagccagccccccgagaacgtgcgcgccatctccatcacctcggatgtggcc
gtgatctcgtggtcggagcccccgcgcagcaccctcaacggggtgctcaagggctaccgg
gtcatcttctggtccctctacatggacggagagtggggcgagatgcagaacatcacgacc
acgcgggagcgggtggagctgcggggcatggagaagttcaccaactacagcgtgcaggtg
ctggcctacacccaggcgggtgacggcgtccgcagcagcgtgctctacatccagaccaag
gaggacattccaggtcccccagctgggatcaaggctgtgccgtcctctgccagcagtgtg
gtggtgtcctggctgccgccggccaagcccaacggcatcattcggaaatacaccatcttc
tgctccagccccggctcggggcagccggctcccagcgagtacgagaccagcccggaccag
ctcttctaccgcatcgcccacctgaaccggggccagcagtacctgctctgggtggccgct
gtcacctccgccggccgcggcaacatcagcgagaaggtgaccatcgagcctgcgggcaaa
gcccctgccaagatcatctccttcggaggcaccgtcaccacgccgtggatgaaggacgtg
cggctgccgtgcaactccgtgggagagccggtccctgccatcaagtggaccaaggacagc
gaggactctgccatcccggtgacagtggacggccaccgcctgatccaggccaacgggacg
ctggtgctgcgctcggtgaaagccgaggactctggctactacacctgcacggccaccaac
acctggggcttcgacaccatcatcatcaacctcctggtgcaagtgcccccggaccagccc
cgcctgaccgtctccaagacctcagcatcgtccatcacgctggcctggatccctggggat
aatgggggcagctccatccgaggcttcgtgctccagtactcggtggacaacagcgaggag
tggaaggacgtgttcatcagctcctccgagcgctccttcaagctggagagcctcaagtgt
ggcacctggtacaaggtgaagctggcggccaagaacagcgtcggcgccggccgcatcagc
gagatcatcgaggccaagacccacggcagagagccctccttcagcaaggaccagcacctc
ttcacccacatcaactccacgcacgccaggctgaacctgcagggctggagcagcgggggc
tgccccatcaccgccatcgtcctggagtaccggcccaagggcaactgggtctggcagagc
ctgcgcaccaacagctccagcgaggtgttcctgaccgagctgcgcgaggccacctggtac
gagctgcgcatgaaggcctgcaacagcgccggctgcggcaacgagaccacgcagttcgcc
acgctggactacgatggcagcaccatccccccgatcaagtctgcccaaggggaaggtgat
gacgtgaagaagctcttcaccatcgcctgccccgtgatcctggccacgctgggagtggcc
ctgctcttcatcatccgcaagaagaggaaggagaagcggctgaagaggcttcgagatgcg
aaaagtttggcagaaatgttgatcagcaagaataaccgcagctttgacacgccggtgaag
gggcccccgcagggcccccgcctgcacatcgacatcccacgggtgcagctcctcatcgag
gacaaggagggcatcaagcagctgggggatgacaaagccacgatcccggtgaccgacacg
gagttcagccaggcagtgaacccccagagcttctgcacgggcgtgtctctgcatcaccca
gccctgatccagaacacggggcccctcatcgacatgtccgacatccgccccggcaccaac
cccgtgtcgaggaagagcgtgaagtctgcgcacagcacccgcaaccgctactccagccag
tggacactcaccaagtgccaggcgtccacccccgccaggaccctcacctcggactggagg
acagtgggctcccagcacggcatcacagtcactgagagtgacagctacagcgccagcctc
tcgcaggacacggacaaggggcggaacagcatggtgtccacggagagcgcctcgtccacc
tacgaggagctggcgcgcgcctacgagcacgccaagctggaggagcagctgcagcacgcc
aagttcgagatcaccgagtgcttcatctccgacagctcctcggaccagatgaccacgggc
accacggacaacgccgacagcatgacctccatgagcaccccgtccgagcccggcatctgc
cgcttcaccgcctccccgcccaagccccaggacagcgagaggggcaagggcgtggccgtg
cccatcccacaccgcgccagcaagagtgactactgcaacctcccgctgtacgtcaagtcg
gaggccttcttccgcaagcccgacgcccacgagccgtgcccggtggtgccgccgcgggaa
gcctccatccgcaacctggcccgggcgtaccacgcgcaggcccggcacatgacgctggag
cccggcgccaaacccctggggctgcctcccccggcctccgccgcaaccaccttacctcag
aggactctccccatgcccggcccggccggccccgcacccgcgcccatgagcacgtcgggg
gtaggcaggtctcaaaaacaaggtgccggagcctactccaagtcctacacgctggtgtag
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