Ficedula albicollis (collared flycatcher): 101822111
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Entry
101822111 CDS
T02815
Symbol
PARP1
Name
(RefSeq) poly(ADP-ribose) polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03410
Base excision repair
fab04210
Apoptosis
fab04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101822111 (PARP1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101822111 (PARP1)
04217 Necroptosis
101822111 (PARP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fab03032
]
101822111 (PARP1)
03036 Chromosome and associated proteins [BR:
fab03036
]
101822111 (PARP1)
03400 DNA repair and recombination proteins [BR:
fab03400
]
101822111 (PARP1)
Enzymes [BR:
fab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
101822111 (PARP1)
DNA replication proteins [BR:
fab03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101822111 (PARP1)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
101822111 (PARP1)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
101822111 (PARP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
101822111
NCBI-ProteinID:
XP_005043071
LinkDB
All DBs
Position
3:16450537..16483537
Genome browser
AA seq
973 aa
AA seq
DB search
MKSPMFDGKVPHWHHYSCFWKRARIVSHTDIDGFSELRWEDQEKIKKAIETGGPGGGKGG
EQEGGGKAEKSLNDFAAEYAKSNRSTCKGCEQKIEKGQIRISKKMVHPEKPQLGMIDNWY
HPECFVSRRAELGFLPAYGATQLLGFSILKAEDKETLKKQLPATKSEGKRKGEEVDGNAT
AKKKPKKEKEKESKHQKQLKEQTELIWGIKDELRKVCSTNDLKELLIANKQEVPSGENAI
LDRVADGMAFGALLPCQECKGQFVFKSDAYYCSGDITAWTKCVAKTQTPNRKDWIIPKEF
REIPYLKKFKCKKQDRVFPPDAATVNSAPPPSASAPLSETVSAPRDKPLTNMKILVVGKL
SKNKEEVKNIVEDLGGKMTTTANKATLCISTQKDVEKMSKKMEEVKEAKVRVVSEAFLQD
VKSSSKDFQELVSLHALSPWGAEVKMEIEEMAVDGKSSKPPSTKSTGKVKEEQGPSKSEK
KMKLTVKGGAAVDPDSGLEDSAHVFEKGGKIFSATLGLVDIVKGTNSYYKLQLLEDDREN
RYWVFRSWGRVGTVIGSNKLEQMPSKEDAIEHFLNLYEEKTGNSWHSKNFTKYPKKFYPL
EIDYGQDEEAVRKLTVGAGTKSKLAKPIQDLIKMIFDVESMKKAMVEFEIDLQKMPLGKL
SKRQIQSAYSILNEVQQAVSDSGSESQILDLSNRFYTLIPHDFGMKKPPLLNNLEYIQAK
VQMLDNLLDIEVAYSLLRGGNEDGDKDPIDINYEKLKTDIKVVDKDSEEAKIIKQYVKNT
HAATHNAYDLKVVEIFRIEREGESQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAP
PEAPVTGYMFGKGIYFADMVSKSANYCHTSQADPIGLVLLGEVALGNMYELKNASHITKL
PKGKHSVKGLGKTAPDPTATTTLGDVEVPLGNGISTGINDTCLLYNEYIVYDVAQVNLKY
LLKLKFNYKTSLW
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacccatgtttgatggcaaagtccctcactggcaccactacagctgcttctgg
aagcgggctcgaattgtgtcccacacagacattgatggcttctctgagcttcggtgggaa
gatcaggagaaaatcaagaaagccattgaaactggaggccctggaggaggaaaaggaggg
gagcaggaaggaggtggtaaggctgagaagagcctaaatgactttgctgcagaatatgcc
aagtctaacagaagtacttgcaaaggctgtgagcagaaaatagaaaagggccagatccgg
atttccaagaagatggtgcatcctgagaagccacagctgggaatgatagataactggtac
cacccggagtgctttgtgagccgccgagcagagctgggcttcctcccggcctacggggcc
acccagctcctgggcttcagcatcctgaaagctgaggataaagaaactctgaaaaagcag
ctcccagctaccaaaagtgaaggaaagagaaaaggagaggaggtagatggaaatgcgaca
gcgaaaaagaagccgaaaaaagaaaaagagaaagaatcaaagcatcaaaaacagctgaag
gagcagacagagctgatctggggcatcaaggatgagctgaggaaggtctgctccaccaat
gacctgaaagagctgctgattgccaacaagcaggaggtcccctcaggggagaatgccatc
ttggaccgagtagcagatgggatggcatttggagctctgctgccctgccaggagtgcaag
gggcagtttgtgttcaagagtgacgcttattactgttcaggggatatcactgcctggacc
aagtgcgtggctaaaacacagactcccaacaggaaagactggataatcccaaaggagttc
cgggaaattccttacctgaagaaattcaaatgtaagaagcaggacagagtgttccctcca
gatgctgcaactgtgaactcggcccctcctccttctgcatctgctcctttgtcagagact
gtgtctgcacccagagacaaaccactgaccaacatgaagatcctggttgtcgggaagctg
tcaaagaacaaagaggaggtgaaaaacattgtggaggacctgggaggaaagatgacaaca
acagctaacaaggccaccctgtgcatcagcacccagaaggatgtggagaaaatgagcaag
aagatggaagaagtgaaggaggccaaagtccgtgtggtctcagaggcatttcttcaggat
gtgaaatcttccagcaaggacttccaggagcttgtgtctctccatgccctgtcaccttgg
ggtgcagaggtgaaaatggagattgaggaaatggctgtggatggaaagagcagcaagccc
ccaagcacaaaaagcactgggaaggtcaaagaagaacaaggacctagcaagtctgaaaag
aaaatgaagttaacagtgaagggtggagcagcagtagaccctgattctggtttggaggat
tctgctcatgtctttgaaaaaggtgggaaaattttcagtgcaaccctgggactagtagat
attgtgaaaggaacaaattcctattataaactgcagctgctagaggatgacagagagaac
agatactgggtgttccgatcctggggccgtgtgggcactgtgatcggcagtaacaagctg
gagcagatgccatcaaaagaagatgccattgaacacttcctgaatttgtatgaagagaaa
actggcaattcttggcattcaaagaacttcactaaatatccaaaaaaattttacccactg
gaaatagattatggacaggatgaagaagctgtcaggaaactgacagtaggtgctgggaca
aaatcaaaactcgctaagccaatccaagatcttattaagatgatctttgatgtggagagc
atgaagaaagcaatggtggaatttgagattgacttgcagaagatgccattgggaaaactg
agcaagagacagatccagagtgcatactccatcctgaatgaggttcagcaggcagtttct
gacagtggttcagaatctcagattttggacctctccaaccgcttttatacactgattcct
catgactttgggatgaagaagccacctctcctgaataacttggaatacattcaggctaaa
gtgcagatgttggacaacttgcttgatattgaggttgcttacagccttctcagaggtgga
aatgaagatggagataaagacccaattgacatcaactatgaaaaacttaaaacagatatt
aaggttgttgacaaagattcagaagaagccaagattatcaaacaatatgtgaagaacact
catgctgctacacacaatgcatatgacctcaaagtcgtggaaatcttcaggattgagcgt
gagggggagagccagcgttacaagcccttcaagcagctccacaaccgccagctgctgtgg
cacggctcccgcaccaccaacttcgccgggatcctctcgcagggtctgcggatagctccg
cctgaagctcctgtgaccggctacatgtttgggaagggcatctattttgcagacatggta
tccaagagtgcgaactactgtcacacatctcaagctgatcccataggtttagttcttctg
ggagaagttgcccttggaaatatgtatgaattaaagaatgcttcccacatcacaaaattg
cccaagggaaaacacagtgtaaaaggcttgggcaaaaccgcacctgatcccacagccact
accacccttggtgatgtagaggttcccttagggaatgggatctccacaggaatcaatgat
acctgtcttctgtataatgaatatattgtgtatgacgttgctcaggtaaatctgaagtac
ctgttgaaactgaaattcaactataagacgtcactctggtga
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