Ficedula albicollis (collared flycatcher): 101822278
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Entry
101822278 CDS
T02815
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101822278
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
fab03310
]
101822278
Transcription factors [BR:
fab03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101822278
Nuclear receptors [BR:
fab03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
101822278
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101822278
NCBI-ProteinID:
XP_005060043
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Position
28:1421451..1436944
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AA seq
465 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQSGGAKDEPEPLSRV
YTTSVSSGLSDLDDISTLSDGLLFDFPLTPDGSSTYYNLDLLTSAQPSPDQSSLDVADAT
LIKQESIYELMLEPALLAHGALEGAQLPPDISVLEIDRVAQNVVKSHLETCQYTTEELKR
LAWSLYSPEEVRALQSKSCEAMWQQCSLQISNAIQYVVEFAKRIDGFMELCQNDQIILLK
AGCLEVLLIRMIRAFNPLNNTVLFEGKFGGMQMFKSLGCDDLIGAIFELGRTLCRLQLSD
EELALFTAAVLLSPDRPWLTESKKVQKLQDKIYVALQHEIQKKHSAEDKLSKMVSKLPLM
KTICNLHLDKLEFFRLVHPETAMNFPPLYKEVFNSELQYSDPRES
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaggtgatcccgtgcaagatctgcggagacaaatcctcagggatc
cactatggtgtcatcacctgcgaaggctgcaagggtttctttcggaggagccagcagaac
aacgccagctactcctgctcccggcagaggaactgcctgatcgaccgcaccaaccgcaac
cgctgccagcactgccgcctgcagaaatgcctggcgctgggcatgtcccgcgacgcggtg
aagttcggccgcatgtccaagaagcagcgggacagcctctatgccgaggtgcagaagcac
cagcagagccaggagcagagcgggggcgccaaggatgagcccgagcccctgagccgcgtc
tacaccacgagcgtcagcagcggcctctcggacctggacgacatctccacgctgtcggac
gggctcctcttcgacttccccctgacccccgatggcagcagcacctactacaacctggac
ctgctgacctcggcgcagccctcgcccgaccagtccagcctggacgtggctgacgccacg
ctcatcaagcaggagtccatctacgagctgatgctggagccggcgctgctggcacacggg
gcgctggagggtgcccagctgccccctgacatctctgtcctggagattgaccgggtggcc
cagaacgtggtgaagtcgcacctggagacgtgccagtacacaacggaggagctcaagcgc
ctggcgtggagcctctactcccccgaggaggtccgtgccctgcagagcaagagctgcgag
gccatgtggcagcagtgctcgctgcagatctccaacgccatccagtacgtggtggagttc
gccaagcgcatcgacggcttcatggagctctgccagaatgaccagatcatcctcctgaaa
gccggttgcctcgaggtgctcctgatccgcatgatccgcgccttcaaccccctgaacaac
accgtcctcttcgagggcaagttcggtgggatgcagatgttcaaatctctcggctgtgac
gacctcatcggtgccatcttcgagctggggaggaccctgtgccgcctgcagctgtcggat
gaggagctcgccctcttcactgctgctgtcctgctgtccccagaccgcccgtggctgacc
gagtccaagaaggtgcaaaagctccaggacaagatctacgtggccctgcagcacgagatc
cagaagaaacactccgctgaggacaagctctcgaagatggtttccaagctgcccttgatg
aagaccatttgcaacctgcacttggacaagctggaatttttccgtctcgtgcaccctgag
actgccatgaacttcccccccctctataaggaggttttcaactcggagcttcagtacagc
gacccccgggagagctaa
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