Ficedula albicollis (collared flycatcher): 107603776
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Entry
107603776 CDS
T02815
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19720
collagen type III alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107603776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fab00536
]
107603776
Glycosaminoglycan binding proteins [BR:
fab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107603776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
107603776
NCBI-ProteinID:
XP_016155510
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Position
8:8246373..8248718
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AA seq
781 aa
AA seq
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MEETVTIPHESIQIPNAFVRWVTEGWPLSTAVRGTAGTELCAGHSRHRAGRAVAPGRDGP
SAPRCRAVCGAQPAQSRAGRGSGPGWPLSTAVPGCVRGTAGTEPGGPWLRAGMAPQHRGA
GLCAGHSRHRAGRAVAPGRDGPSAPRCRAVCGAQPAQSRAGRGSGPGWPLSTAVPGCVRG
TAGTEPGGPWLRAGMAPQHRGAGLCAGHSRHRAGRAVAPGRDGPSAPRCRAVCGAQPAQS
RAGRGSGPGWPLSTAVPGCVRGTAGTEPGGPWLRAGMAPQHRGAGLCAGHSRHRAGRAVA
PGRDGPSAPRCRAVCGAQPAQSRAGRGSGPGWPLSTAVPGCVRGTAGTEPGGPWLRAGMA
PQHRGAGLCAGHSRHRAGRAVAPGRDGPSAPRCRAVCGAQPAQSRAGRGSGPGWPLSTAV
PGCVRGTAGTEPGGPWLRAGMAPQHRGAGLCAGHSRHRAGRAVAPGRDGPSAPRCRAVCG
AQPAQSRAGRGSGPGWPLSTAVPGCVRGTAGTEPGGPWLRAGMAPQHRGAGLCAGHSRHR
AGRAVAPGRDGPSAPRCRAVCGAQPAQSRAGRGSGPGWPLSTAVPGCVRGTAGTEPGGPW
LRAGMAPQHRGAGLCAGHSRHRAGRAVAPGRDGPSAPRCRAVCGAQPAQSRAGRGSGPGW
PLSTAVPGCVRGTAGTEPGGPWLRAGMAPQHRGAGLCAGHSRHRAGRAVAPGRDGPSAPR
CRAVCGAQPAQSRAGRGSGPGWPLSTAVPGCVRGTAGTEPGGALPWHRQGADSKFPVLSV
L
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacggtgacaataccgcacgaatccattcaaatacccaacgcctttgtccga
tgggtcactgagggatggcccctcagcaccgcggtgcggggcacagccggcacagagctg
tgtgcggggcacagccggcacagagccgggcgggccgtggctccgggccgggatggcccc
tcagcaccgcggtgccgggctgtgtgcggggcacagccggcacagagccgggcgggccgt
ggctccgggccgggatggcccctcagcaccgcggtgccgggctgtgtgcggggcacagcc
ggcacagagccgggcgggccgtggctccgggccgggatggcccctcagcaccgcggtgcc
gggctgtgtgcggggcacagccggcacagagccgggcgggccgtggctccgggccgggat
ggcccctcagcaccgcggtgccgggctgtgtgcggggcacagccggcacagagccgggcg
ggccgtggctccgggccgggatggcccctcagcaccgcggtgccgggctgtgtgcggggc
acagccggcacagagccgggcgggccgtggctccgggccgggatggcccctcagcaccgc
ggtgccgggctgtgtgcggggcacagccggcacagagccgggcgggccgtggctccgggc
cgggatggcccctcagcaccgcggtgccgggctgtgtgcggggcacagccggcacagagc
cgggcgggccgtggctccgggccgggatggcccctcagcaccgcggtgccgggctgtgtg
cggggcacagccggcacagagccgggcgggccgtggctccgggccgggatggcccctcag
caccgcggtgccgggctgtgtgcggggcacagccggcacagagccgggcgggccgtggct
ccgggccgggatggcccctcagcaccgcggtgccgggctgtgtgcggggcacagccggca
cagagccgggcgggccgtggctccgggccgggatggcccctcagcaccgcggtgccgggc
tgtgtgcggggcacagccggcacagagccgggcgggccgtggctccgggccgggatggcc
cctcagcaccgcggtgccgggctgtgtgcggggcacagccggcacagagccgggcgggcc
gtggctccgggccgggatggcccctcagcaccgcggtgccgggctgtgtgcggggcacag
ccggcacagagccgggcgggccgtggctccgggccgggatggcccctcagcaccgcggtg
ccgggctgtgtgcggggcacagccggcacagagccgggcgggccgtggctccgggccggg
atggcccctcagcaccgcggtgccgggctgtgtgcggggcacagccggcacagagccggg
cgggccgtggctccgggccgggatggcccctcagcaccgcggtgccgggctgtgtgcggg
gcacagccggcacagagccgggcgggccgtggctccgggccgggatggcccctcagcacc
gcggtgccgggctgtgtgcggggcacagccggcacagagccgggcgggccgtggctccgg
gccgggatggcccctcagcaccgcggtgccgggctgtgtgcggggcacagccggcacaga
gccgggcgggccgtggctccgggccgggatggcccctcagcaccgcggtgccgggctgtg
tgcggggcacagccggcacagagccgggcgggccgtggctccgggccgggatggcccctc
agcaccgcggtgccgggctgtgtgcggggcacagccggcacagagccgggcgggccgtgg
ctccgggccgggatggcccctcagcaccgcggtgccgggctgtgtgcggggcacagccgg
cacagagccgggcgggccgtggctccgggccgggatggcccctcagcaccgcggtgccgg
gctgtgtgcggggcacagccggcacagagccgggcgggccgtggctccgggccgggatgg
cccctcagcaccgcggtgccgggctgtgtgcggggcacagccggcacagagccgggcggg
ccgtggctccgggccgggatggcccctcagcaccgcggtgccgggctgtgtgcggggcac
agccggcacagagccgggcgggccgtggctccgggccgggatggcccctcagcaccgcgg
tgccgggctgtgtgcggggcacagccggcacagagccgggcgggccgtggctccgggccg
ggatggcccctcagcaccgcggtgccgggctgtgtgcggggcacagccggcacagagccg
ggcggcgctttgccttggcacaggcagggcgctgactctaagttccctgtgctctcagtc
ctatag
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