Ficedula albicollis (collared flycatcher): 107604080
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Entry
107604080 CDS
T02815
Symbol
RNF43
Name
(RefSeq) ring finger protein 43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107604080 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
107604080 (RNF43)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107604080 (RNF43)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107604080 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
107604080
NCBI-ProteinID:
XP_016158557
LinkDB
All DBs
Position
19:complement(465805..525367)
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AA seq
830 aa
AA seq
DB search
MSAGPQVQLAVLWPWLLMATLQAGLGHTGLALAAAVESERAAAQKAIIRVIPLKVEPITL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTLQAIGQLATR
RYQPRARPAPRWDSASSCSSAPLCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSGDQAMAASSRLVPQDMEPGRRLHLFRQHPGHALYHLPHAYPQRSLRS
FPSEPAHGNPFFHSPELSHLDFGTIHYMPYRPATSLLACGHVAPLAPGLLGQQHPSPSAC
GQALAPHRTCPLQPQPPCLVPKAALAQKQHRAPTLRRGLGHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
ATDHGQEQLRPPRERRPRSLDLMVPGGAAPAKPQVLSHVHYHHHQHHHYRRDAECPPGRA
GQGPGPRRSRYSGAKVAFHSARTQKRTEKSHHSQQPLESSGVLQEAAPAGQPTCPKEGRE
PPHSPSTSPDRLDFSVDASRQLGAAGTPPVPLPPRHSLQRRHHRRKRKCPLEPDPALLAK
DSAEPGACDTHLPPGRPAGYRCSPEAQPLLPSAPLPSGSRLLWKCLVPQSSSELRKQEEG
LSGRERNRSVPADFSGMGAPRHSLSVRLHCPAQQGQGSEDEVQDVHEHSV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccaggtgcagctggctgtcctctggccttggctgctcatggcgacc
ctgcaggcaggactgggccacaccgggctggcgctggcggcggccgtggagtcggagcgg
gcggcggcgcagaaagccatcatcagggtgatcccactcaaagtggagcccatcaccctg
gaaggggagttcgccaacgttgccgaggtgactccggccgaagggaagctgctgcagtcc
cacccgctatccctgtgcaacaccagcgaggatgaacacacggagtcggggttcatcacc
atcgtcaagctggaacagccggatcgggaccccaacccctgcctgtccctggccaacaag
gcaaagctggcaggggagcgtggagcgcgtgcgatccttttcgacatcaccgatgatgaa
agtgctgctgatcagctgaggaagcccagaggcctgagccagcccgtggtcctgatcagg
ggccacgacgctgagctcctcatgggtgtcgtgaacaagaacagagaggcccatgtgaag
atagaggtcaaggagccaccagcttggccagactacgacgtgtggattcttctcacagtg
gtcagcactgtggtcgtcatcattttaatttttgttgtccgcacaaagtgccagctgaac
aggactcaggactcggtgcagcagcagaccctgcaggccatcgggcagttggccacgcgc
cgctaccagccgcgggcgcggccggccccgcgctgggactcggccagcagctgcagctcc
gccccgctctgtgccatctgcctcgaggagttcagcgaggggcaggaactgcggatcatc
tcatgctcacacgagttccatcgggagtgtgttgacccttggctgcagcaacaccacacg
tgtccactctgcatgttcaatattcttgccagagactcaggggaccaggccatggctgcc
agctccaggctggtccctcaggacatggagcctgggcggcgactccaccttttccgccag
catccaggacatgccctttaccaccttccacacgcatatcctcagaggagcctcaggagc
tttccctcagagccagcccacggcaaccccttcttccactctccagagctctcccacctg
gactttggcaccatccactacatgccctacagaccagccacctccctgctggcctgcggc
cacgtggccccgctggccccgggcttgctgggccagcagcatcccagcccctctgcgtgc
gggcaggcgctggcaccccacaggacgtgtccccttcaacctcagcccccctgtctggtg
cccaaggcagccctggcacagaagcagcaccgtgcacccaccctgcgccgggggcttggc
cacgggcaccagcacaacagcagtggctctggggagagctatctcacggagcacagcggg
tacctggccgacgggccaggcagcgactccagctcggggccctgccacggctcctccagt
gactccatgttgaactgcacggacgtcagcctgcagggcatccacggcagctgctccacc
ttccgcagctccctcagcagcgactacgatccctttgtgtactgcagctccgagggcccc
gccacggaccacggccaggagcagctgcggccgcccagggagaggcggccgcgctccttg
gacttgatggtgccagggggggcggctccggccaagccccaggtgctcagccacgtccac
taccaccaccaccagcaccaccactacaggcgggatgcagagtgtccccctgggcgggcc
ggccaggggccggggccacgcagatcccggtactctggggccaaggttgccttccacagt
gctcggacgcaaaagaggactgagaaaagccatcactctcagcagcctctggaaagcagt
ggagtgctgcaggaggcagctccagcaggacagccaacgtgtcccaaggaaggccgggag
ccccctcacagcccctccacttctccagacaggttggacttcagtgtagatgccagcaga
caattgggagcagccggcacaccccctgtcccgctgccccccagacacagcttacagcgc
aggcatcaccgacggaaaagaaagtgtcccctggagcccgaccccgctctcctggccaag
gactcggccgagcccggagcctgtgacactcaccttcctcctggccgtcctgctggctac
cgctgctctcctgaagcccagcccctgctccccagcgctcccctgcccagcggctcccgg
ctgctctggaagtgcttagtgccacagtccagctccgagctgaggaagcaggaggagggg
ttgtcaggacgggagagaaaccgctcagttcctgcagatttctcagggatgggcgccccc
agacacagtctgagtgtccgccttcactgcccagctcagcagggtcagggatctgaagac
gaggtccaggatgtccatgaacactcagtttaa
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