Ficedula albicollis (collared flycatcher): 107604372
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Entry
107604372 CDS
T02815
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
107604372
Cell adhesion molecules [BR:
fab04515
]
Cadherins
Protocadherins
107604372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
107604372
NCBI-ProteinID:
XP_016160885
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Position
Un
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AA seq
818 aa
AA seq
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MKLRKSEESLPRRAAALILVLCVSGMRAETARYSVPEEAERGSFVANIAKDLGLTGEELL
ARQARVVPEGEKQYLQLNQHTGDLVVREQMDREELCGQSEPCWVRFEVLLESPLQSFRAE
VRLTDINDHAPVFPNKEIVLKMPESTVPGSRFLLESAQDPDVGNNSLQHYSIGSNEYFLV
YTRRRSDGGRYAELVLDRALDREQQAEIAFGITAVDGGTPPRSGTALIRIVVLDINDNMP
VFTQTLYKVSVKENSSQDTIVVVVSASDLDAGTNGEIVYSIAQNSEENLQTFKINPETGQ
IRLKKPLDYEEKKTYEIDVQATDGGGLSTHCKVEVQVKDVNDNAPEVIITSLTSTLSEAA
PPNTVVALFNVRDRDSGDNGRTTCELTGEQPFRITLLAADAYALVTSESLDREQVEEYNV
TVRARDEGSPTLSTSKTLLVRLSDVNDNAPTFTQEVYTMVINENEPAGRILGHLSATDPD
AGENARVRYSLVPPPTGALGAASFVSVDAESGTVRSLRALDYEKVRAFEVTVRAADGGSP
PLSAQAVLRVLVRDENDNAPVLLHPPPDSSAAGELVPRWAPSGYLVAKVVAVDADAGQNA
WLSYELAKATEPALFRVGLHSGEVRTARAVTERDAARQKLIVLVRDRGQPPRSATATLAV
ALVDDFSDAFHQLGHDPAGGQLPQVAEEEMLTTYLIASLCCVSSLFVLSVLVLTANTFCK
TRVRADLPPASPSCYGDGDFASSGMGVGSTGTLSPAYRYEMCLTSGSGRSEFQFLRPILP
SPHSNDEAGQEKDEEPLRCLQPACDREAHKGSTATPLF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaggaagagcgaggaatcgctcccgaggcgagcggcggctctgatccttgtc
ctttgcgtctcggggatgcgagcagaaaccgctcggtactccgtgcccgaagaggcggag
agaggctcttttgtggcgaatatcgctaaggatttggggctaaccggtgaggaactattg
gctcgtcaggctcgagtcgttcctgaaggagaaaagcagtatttgcagctgaatcagcac
accggggatttggtggtgagagagcaaatggaccgagaggagctgtgtggacaaagcgag
ccctgctgggtgcgttttgaggtgctgctggagagcccactgcagtccttccgagctgag
gtaagactcaccgacataaatgatcacgctcccgtgttcccaaataaagagatagtttta
aagatgccggagtcgacagtgccggggtctcggtttttattggaaagtgcacaggatcca
gacgtggggaacaatagtcttcagcattatagtatcggctcaaacgagtattttctcgtc
tacacccggcggcggagtgacggcgggagatatgccgagctggtcttggatcgagccctg
gaccgggagcagcaggcagaaattgctttcggcatcacggctgtggatggtgggactcca
ccgcggtctggcacagctttaatccgcatagttgtcctggatataaacgacaacatgccg
gtatttacgcagactctgtataaagtctctgtaaaggaaaatagctcccaggataccata
gtggtggttgtgtctgcaagcgatttggacgcaggaacgaatggggaaatagtatactcc
atagctcaaaattcagaggaaaatctccaaacatttaaaataaatccagagacaggccag
attcgactcaaaaagcctttggattacgaagaaaaaaagacctatgagatagacgtccaa
gccacagatggagggggcctgtccacgcattgcaaggtggaggtgcaggtgaaggacgtg
aacgataatgcccccgaggtgatcatcacctctctcaccagcaccctctccgaagcagcc
ccgccgaacaccgtggtggctctcttcaatgtgcgggaccgggactcgggggacaatggc
aggacgacctgcgagctgacaggagagcagcccttcaggatcacgctgctggcagccgac
gcgtacgcgctggtgacatcagagtcactggaccgggagcaggtggaggaatacaacgtg
acagtgcgagctcgcgacgagggttcccccaccctctcgacatccaagaccctcctcgtg
cggctgtcggatgtgaacgacaatgcacccaccttcacccaggaggtttacactatggtg
ataaacgaaaacgagcccgcggggaggatcctgggccacctcagtgccacagatcctgac
gcgggagaaaacgcccgagtgagatactcgctggtgccgccaccgaccggtgccctcggc
gcggcatcattcgtgtcagtggatgcggagagtggaaccgtgcggagtttgcgcgcactg
gactatgagaaggtgcgcgctttcgaggtgacagtgcgcgcagccgacggcgggtccccg
ccgctcagcgcccaggccgtgctgcgcgtgctcgtgcgggacgagaacgataacgcgccc
gtgctgctgcacccgccccccgacagcagcgcggccggagagctggtgccgcgctgggca
ccgtccggctacctggtggccaaggtggtggcggtggacgcggacgcgggtcagaacgcg
tggctgtcgtacgagctggccaaggccacggagccggcgctgttccgcgtggggctgcac
agcggcgaggtgcgcacggcgcgggccgtgacagagagggacgcggcgcggcagaagctc
atcgtgctggtgcgggaccgcgggcagccaccgcgctctgccactgccaccctcgccgtg
gcactggtggacgatttctccgatgccttccaccagcttggccacgatcctgcaggcgga
cagctgccgcaggtggcagaggaggaaatgctcacgacttacctcatcgcctccctgtgc
tgcgtctcgtcccttttcgtcttgtccgtcctcgtcttgacggcgaacacgttctgcaaa
actcgcgtccgggcagatcttcctcctgcctctcccagctgctacggggatggagacttc
gccagcagcggcatgggcgtgggcagcacgggcacgctgtcgccggcttatcgctacgaa
atgtgtctgaccagcggctcggggaggagcgaattccagttcctcaggcccatcctgcct
agccctcatagcaatgacgaggcggggcaggaaaaggacgaggagccgctacgctgcttg
cagcctgcctgcgacagagaagcccacaaggggagcacagccactcctctcttttag
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