Ficedula albicollis (collared flycatcher): 107604408
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Entry
107604408 CDS
T02815
Symbol
GTF2F1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107604408 (GTF2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
107604408 (GTF2F1)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107604408 (GTF2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF5870
Motif
Other DBs
NCBI-GeneID:
107604408
NCBI-ProteinID:
XP_016160968
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Position
Un
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AA seq
404 aa
AA seq
DB search
MPPKYSPGPPNPFEESPRTPPWPPKSTLGSPQTLLSPLNSPRRNKVLNHFSIMQQRRLRD
QDEEEEDKDKGRKAPGKGGGLRIHDLEEDLELSSEESEGSEAEGEKAARPKAAGGRPKRK
RRKGRKGSEDEALEDSDDGDFEGQEVDYMSDGSSSGEEEAGKAKAPKEEEEGPKGIDEAS
ESSEESEEEKAEEKEEEEEGKATPTPQEKKKKRGRTSLNNRPRQELGRNPQRTGFMASST
PRKQRRVADLGGERHRQGVVAEDQGHPAPPRHPEPPKKRLLVREDLVGELVPGSTPAGDR
GSGGLQISPGVPKTPTGSSQGGPQTHRRTTLGDSSDTPAMVQPQNWGGEDAPETPQNHPG
TPETCPPQTPLGLSQTHRGPPTPPHPAPDPGTAKLPPGPPSPPP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgccccccaaatattctcctggacccccaaatccctttgaggaatcccccaggacccct
ccctggccccctaaatccactcttggatcccctcagaccctgctgagtcccctcaactcc
cccaggaggaacaaggtgctgaaccacttcagcatcatgcagcagcggcgcctgcgggac
caggacgaggaggaggaggacaaggacaaggggaggaaggccccaggcaagggtggaggg
ctccggatccacgacctggaggaggatctggagctcagctccgaggagagcgagggcagc
gaggccgagggggagaaggcagcgaggccgaaggctgcgggggggcggcccaagaggaag
aggaggaagggcaggaagggctccgaggacgaggccctggaggacagcgacgacggcgac
ttcgagggccaggaggtggattacatgtctgacggctccagctccggggaggaagaggcc
ggcaaagccaaagcacccaaggaggaagaggaaggcccgaaaggcatcgacgaggcgagc
gagagcagcgaggagagcgaggaggagaaggcggaggagaaggaggaggaggaggaggga
aaagcgacccccactccccaggagaagaagaagaagagaggtaggacctcccttaacaac
cgcccgcggcaggaattggggagaaacccccaaagaacggggtttatggcgtcatcaacc
cccagaaagcagcgacgagtcgcagacctcggaggagagcgacatcgacagggggtcgtt
gcggaagatcagggccacccggcgcccccgcggcacccggagccccccaaaaaacgattg
ctcgtccgggaggatctcgtgggtgaactcgtacctggcagcacccctgcaggggatcgg
gggtcagggggtcttcagatttccccaggggtccccaaaacccccacggggagttcccaa
gggggcccccagacccaccggaggacgacgctgggggacagcagcgacacccccgcgatg
gtgcagccgcagaactgggggggcgaagacgcgcctgagacccctcaaaaccaccctggg
acccccgaaacttgcccaccgcaaactcccctcgggctctcccaaacccaccgaggacct
ccaacccctcctcacccggcgcccgacccgggcacggccaaactccccccgggacccccg
agccccccaccttaa
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