Ficedula albicollis (collared flycatcher): 107604490
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Entry
107604490 CDS
T02815
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
107604490
Cell adhesion molecules [BR:
fab04515
]
Cadherins
Protocadherins
107604490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
107604490
NCBI-ProteinID:
XP_016161207
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Position
Un
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AA seq
659 aa
AA seq
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MAIARQVLCLSAFLALPLARAEPIRYSVAEEAESGSLVGKLAEDAGLTPPQLSARRARLL
SEDGRQHLRLDRGSGRLLVAGRLDREELCAHSATCMLPFELLLSDPLQFFRVEVSLEDIN
DNSPVFPEERVMFKILETSETGSRFPLDVALDLDIGSNTVQAYSISPQNKYFSVSYGTRT
NGDKFLELVLEKSLDREEQAEMRFSVIAEDGGSPPRSGTTEIKIVILDVNDNAPVFTQQR
YISKVLENMPEGSVVLTVLATDQDAGDNGDITYQLNQAVGQSDSAFVIDARTGDIKITKP
LDFEEAGTHDLSVRATDGGGLSAICKVLVEVVDVNDNAPELAVSSFSSPLPENTVPGTVV
ALFTVRDRDSGANGKISCALDDQLFFSLRPAYKNYYELVTVSALDRERTARYVLGVTAAD
AGSPPLTSTHTFTVDISDVNDNAPVFNQTSYTMYVRENNAPTVFVGAVSAADADVGLNAK
VTYSLAPVPAAERPSCSCISVNSENGHVFVLRPLDYERLRQSEVTVSASDAGSPPLRANV
TVRLVVLDENDNAPLVLYPAQDGSAASSELVPVSAEPGYLVTKVVAVDADSGQNSWLSYH
LLRATEPGLFSVAVQSGEVRLKRPVTERDSAKHKLLVLVRDNGKPPLSATAALSALLLK
NT seq
1978 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctctgctttcctggcgctgccgctcgctcgc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtcggcaag
ctggcggaggacgcggggctgacgccgccgcagctctcggctcgccgcgcccgcctgctc
tcggaggacggccggcagcatttgcgcttagaccgcggctccggccgcctcctcgtggcg
gggaggctcgaccgggaggagctgtgcgcccactcggccacctgcatgctccccttcgag
ctgctgctctccgaccccctgcagttctttcgggtcgaggtatccctggaagatatcaat
gacaattcacccgtcttccccgaggaacgagtcatgtttaagatcctggaaacaagcgag
acaggctcacgtttcccgctagatgtggctctggaccttgatattggcagcaacacagtg
caggcatacagtatctctccccagaacaaatatttcagtgtctcctatgggactcggaca
aatggagacaagtttcttgaacttgttttagaaaagtctctagatagggaggagcaggca
gagatgcgtttcagtgttattgctgaagatgggggctctcctcccaggagtggcaccacc
gaaattaagattgtcattctagatgtaaatgacaatgctcccgtgttcacgcaacagcgt
tacatttcaaaggtcctggagaacatgcctgaaggttctgtggttctgactgtgctggca
accgatcaggatgcaggggataacggggacatcacctatcaactcaaccaggcagtgggg
cagagcgactcagcatttgtgattgatgccagaactggggacattaaaatcacaaaaccc
ctggacttcgaagaagcaggcactcatgacctcagtgtgagagctacagatggtggaggg
ctctcagctatctgcaaagtgctggtggaggtggtggatgtgaatgacaatgccccagag
ctggcggtcagttccttcagcagtcccctccccgagaacacggtgcccggcaccgtggtt
gccctgtttacggtcagggaccgcgattctggtgccaacgggaagatctcgtgcgccctg
gacgatcagctcttcttctccctgcggccagcctataagaattactacgagctggtgaca
gtgagcgcgctggaccgcgagcgcacggctcgctacgtgctcggtgtcacagccgcagat
gcgggctcgccgcctctcacgagcacgcacaccttcaccgtggacatctcggacgtcaat
gacaacgcgcccgtcttcaaccagacctcctacaccatgtacgtgcgggagaacaacgcg
cccacggtgtttgtgggagccgtgagcgctgcagatgctgacgtggggctcaatgccaag
gtgacctactcgctggccccggtgccggcggcagagcggccctcgtgctcctgcatctcg
gtgaactcggagaacggacacgtgtttgtgctgcggccgctggactacgagcgcttgcgg
cagagcgaggtgacggtcagcgcctctgacgcgggctctcctcccctgcgagccaacgtc
accgtgcgcctcgtggtgctggacgagaacgacaacgcgccgctcgtgctctacccggcc
caggacggcagcgcagcgtccagcgagctcgtgcccgtgtcggctgagccgggctacctc
gtcaccaaagtggtggccgtcgatgccgactccggacagaactcctggctctcgtaccac
ctgctcagggccaccgagcccggcctgttcagcgtggctgtgcagagcggcgaggtgcgt
ctcaagaggccggtgacggagagggacagcgccaagcacaagctcctcgtcctggtcagg
gacaacggcaagcccccgctgtcagccaccgcggctctgagcgcgctcctgctcaaga
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