Ferroplasma acidarmanus: FACI_IFERC01G0889
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Entry
FACI_IFERC01G0889 CDS
T02713
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
fac
Ferroplasma acidarmanus
Brite
KEGG Orthology (KO) [BR:
fac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fac03016
]
FACI_IFERC01G0889
Enzymes [BR:
fac01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
FACI_IFERC01G0889
Transfer RNA biogenesis [BR:
fac03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
FACI_IFERC01G0889
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
ATG8
VtrC
Motif
Other DBs
NCBI-ProteinID:
AGO60869
UniProt:
S0AS78
LinkDB
All DBs
Position
complement(882245..883111)
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AA seq
288 aa
AA seq
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MEIVCRNTHFVLSGMDISQIINKYHVGKMRANVLELDPCECIYLYMKGKIMPEPEMGLPQ
VISSVFSEDLYIYFVYSILKGKGLIVKRDGNKFFYKKPGGEYGIPVILIKEGDLIDFSSL
YVDLPAIFITVDEEKSITYFRADFIDPEGNADSDISIGNPEKLNNIYYTTNSHPEWFGQE
FMGVKILNQFEANYISGELKTDEDKLYRDLIKRHFIVKSGFKYGQNFRIYSDSMENHAEF
LVSLMTSEKWYKISRAIRLSTSVRKKTLIAGFIGDDLKYIYIERLRDI
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgtatgcagaaacacacattttgttttgtctggcatggatatttcacagata
atcaataaataccatgttggaaagatgagggctaatgtgctggaactggatccctgtgaa
tgcatatacctgtatatgaaaggaaaaataatgccggaaccggaaatgggattgccgcag
gttataagcagtgtgttcagcgaagacctttacatctattttgtatattctattttaaaa
gggaaagggctaattgtaaaaagggatggaaataagtttttctacaaaaaacccggcgga
gaatacggcatacctgttatacttatcaaggaaggcgatttaatagacttctcaagcctc
tatgtggatctgcctgcaatattcataaccgttgatgaagaaaaaagcataacatacttc
agggcagattttattgatccggaggggaacgcagattcagatatttccataggaaatcct
gaaaaattgaataacatatattacacaacaaacagccatcccgaatggttcgggcaggaa
ttcatgggtgtcaaaatactcaaccagtttgaagcaaattatatttctggagaattaaaa
acagatgaggataagctttacagggatcttataaaaaggcattttattgtcaaaagtgga
tttaaatacgggcagaatttcaggatttattcagattctatggaaaaccatgcagaattt
cttgttagccttatgacttctgagaaatggtataaaataagcagggcaataagattgtcc
accagtgtgaggaaaaaaaccctgattgctgggtttataggcgatgatttaaaatatatt
tatatagaaagattaagggatatttag
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