Ferroplasma acidarmanus: FACI_IFERC01G1017
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Entry
FACI_IFERC01G1017 CDS
T02713
Name
(GenBank) hypothetical protein
KO
K11600
exosome complex component RRP41
Organism
fac
Ferroplasma acidarmanus
Pathway
fac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FACI_IFERC01G1017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fac03019
]
FACI_IFERC01G1017
Messenger RNA biogenesis [BR:
fac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FACI_IFERC01G1017
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
FACI_IFERC01G1017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AGO60997
UniProt:
S0AQE3
LinkDB
All DBs
Position
1002946..1003668
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AA seq
240 aa
AA seq
DB search
MEGNIKLMREDGLRLDGRSLNEMRPIKIQTGVVERADGSAFIEWGANKIIVAVYVREAYP
KHAQNIDRAIVKARYNMSGYSVEERKRPGPDRRTMEISKVVSEALSSAIVLEKLPRAEID
VFIQVLEADAGTRIASLTASSVAVADAGVPMRDLVVGCTAGKADGKIVLDLSKDEDNFGQ
ADIPMAILPRTGKVVLLQLDGDVTEEEFNEATSMMMDAMPRISELQRNALMSKYSIEDGE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaatataaaattgatgagagaagatgggctcaggcttgatgggaggtcattg
aatgaaatgcgccccataaagatccagacaggagttgtggaacgcgcagatggttcagca
tttatagaatggggtgctaataaaatcattgttgcagtatacgtaagggaagcctatcca
aaacatgcccagaatattgacagggctatagtaaaggcaaggtataatatgtcaggatat
tcagtagaggagagaaaacgcccgggtccggacagaaggaccatggaaatatcgaaggtt
gtttcggaagcattatcttctgcaattgtccttgaaaagctcccgagggctgaaattgat
gtgtttatccaggttctggaagctgatgcaggcacaagaatagcgagccttacagcttca
tcagtggctgttgcagatgccggtgttcccatgagggatcttgtagtaggatgtactgca
ggaaaggcagatggaaagattgtacttgacctttcaaaggatgaggacaatttcggccag
gcagatataccgatggctattttgcccagaactggaaaagtagtattattacagcttgac
ggggacgttacagaagaagagtttaatgaagccacatcgatgatgatggatgcaatgcca
agaatttcggaattgcagagaaacgctttgatgagcaaatacagtatagaggatggtgaa
taa
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