Ferroplasma acidarmanus: FACI_IFERC01G1188
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Entry
FACI_IFERC01G1188 CDS
T02713
Name
(GenBank) exosome complex RNA-binding protein Csl4
KO
K07573
exosome complex component CSL4
Organism
fac
Ferroplasma acidarmanus
Pathway
fac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FACI_IFERC01G1188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fac03019
]
FACI_IFERC01G1188
Messenger RNA biogenesis [BR:
fac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FACI_IFERC01G1188
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
FACI_IFERC01G1188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
Zn_ribbon_RRN7
Trm112p
FYVE
Zn_Ribbon_TF
A2L_zn_ribbon
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
AGO61168
UniProt:
S0APH0
LinkDB
All DBs
Position
1148904..1149479
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AA seq
191 aa
AA seq
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MEQVKDIVFPGDIIAKEEEYLSGKNTQDIDGDVISTAFGRVSRDDKSLTISVDTSRQPVI
VKRYDIVYGKIIKILNKEAVILISGVVKGNALVPANTEARLKLPIPNKTMYSHIITLGDL
VRAKIISTRPLYATIFDPNLGILKSKCTICRSDLVAENGKLYCRNCGRVEQRKIASDYGN
INISGVNYERS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagttaaagatatagtattcccaggtgacataatagccaaggaggaagaatac
ctttcaggaaagaatacacaggacattgatggtgatgtcatatctactgctttcggaaga
gtcagcagggatgacaaatctcttaccatatcggttgatacatccaggcagccagtaata
gtaaagagatatgacattgtatatggcaaaataataaaaatattaaacaaggaggcagta
atattgatttcaggggttgtaaaaggaaatgcccttgtaccggccaacacagaggccagg
cttaagttgccaattcccaacaaaactatgtattctcatattattactcttggagacctt
gtaagggcaaaaattataagtacacgaccactttatgccacaatatttgaccccaatctt
ggtatactgaagagcaaatgtacaatatgcaggagcgacctagttgcagagaatggaaaa
ctatactgcaggaactgtgggagagtcgaacagagaaaaattgcctcagattatggcaat
ataaatatatcaggtgttaattatgaaagaagctga
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