Francisella adeliensis: CDH04_06190
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Entry
CDH04_06190 CDS
T06148
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fad
Francisella adeliensis
Pathway
fad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDH04_06190 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fad03019
]
CDH04_06190 (pnp)
03016 Transfer RNA biogenesis [BR:
fad03016
]
CDH04_06190 (pnp)
Enzymes [BR:
fad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CDH04_06190 (pnp)
Messenger RNA biogenesis [BR:
fad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDH04_06190 (pnp)
Transfer RNA biogenesis [BR:
fad03016
]
Prokaryotic type
tRNA degradation factors
CDH04_06190 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
RecX_HTH2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AXA34024
UniProt:
A0A2Z4XZ36
LinkDB
All DBs
Position
complement(1279034..1281115)
Genome browser
AA seq
693 aa
AA seq
DB search
MKIYKEVFELGDKEITIETGGMARQADGSVTVSCGSNVVLVTTVVKKSVAPGQDFFPLSV
HYLEKTYAAGKIPGGFLRREGRPSEEQILISRLIDRSIRPSFPDGFFNEIQIVATVISYD
GSFSPDMLALIGASASLALTGAPYEDIIAGVRVGFVNGKYTLNPNKEDLKESALDLVVSG
TDDAILMVESEAKSLPESVMLGGILYAHKHLKTIISSITKLAKVAAKPAMEYTVYEINKI
LKAQIKSNFFGEIKHAYSFASKQERNVKLSELRKKVLEYVYTNDTDNHDYSEKEIVDAFH
DIEKDLVRSNILEGSPRIDGRATDVIRPINVKTGVLPGVHGSALFTRGETQALVVTTLGS
DRDAQMVESLDGMERSRYMLHYNFPPYSVGECGMVGMAPKRREIGHANLAKRATQAVFPN
QDAYPYVVRIVSEILESNGSSSMATVCGSSLSMMDAGVPIAEPVAGIAMGLIKDGSKYAV
LSDILGDEDHLGDMDFKVAGTRYGVTALQMDIKIKGISRDILEQALEQARSGRLHILGIM
NEVIKEHKETVSNVAPQIHVMNIKPAKIKDVVGRGGSTVKGIAEKTGAQIDTSDTGEVKI
FARDKASLDMAVMMVEEVVAEAEEGQVYKGKIVKILDSGAFVNLFGKQDGYLPFADVEQA
GIKTNSLSEGQPLEVVVQAVDRMGRVKVGIVKR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatatacaaagaagtttttgaattaggggataaagagataactatcgaaactggc
ggcatggctcgtcaagctgatggttctgttacagtaagctgtggtagcaatgtggtttta
gtaactacagttgttaagaaatcagtagcacctggacaagatttttttcctctttcagta
cattatttagaaaaaacatatgctgcaggtaaaattcctggtgggtttttaagaagagaa
ggtagaccttcagaagagcagattcttatatctcgccttatagatagatctattagacca
tctttcccggatggtttttttaatgaaatccaaatagtagcgactgtaatttcttatgat
ggtagtttttcaccagatatgttagctctaataggtgcgtcagcttctctagcgcttact
ggtgctccttatgaggatataattgctggtgtaagagtaggttttgtgaatggaaaatac
acgcttaatccaaataaagaagatttaaaagaatcagctttagatttagtggtttctggt
actgatgatgctatattgatggtagagtcagaagctaaaagcttacctgagtcagttatg
cttggtggtatcttatatgcacataagcatttaaagactattatttcgtctataactaaa
cttgcaaaagtagctgcaaaaccagctatggagtatactgtttatgagattaataagatt
cttaaggctcaaattaagtcaaatttctttggtgaaataaaacatgcttattcatttgca
tctaaacaagaaagaaatgtgaagctttctgaattaagaaagaaagtattagagtatgtt
tatacaaatgatactgacaatcacgactattcagaaaaagaaatagttgatgctttccat
gatatagaaaaagaccttgtaagatcaaatatacttgaaggtagtccaagaatcgatggt
agagctacagatgtaattcgtccaatcaatgttaaaactggcgtattaccgggtgttcat
ggttcggcattatttacacgtggtgaaactcaagcattagttgtaacgacactaggtagt
gatcgtgatgcacagatggttgagagcctagatggtatggaaagatctcgttacatgctt
cactataacttccctccctattctgtaggtgagtgcggtatggttggtatggcacctaag
cgccgtgagattggtcatgctaatcttgcaaaacgagcaactcaagcagtatttccaaat
caagatgcatacccttatgtagtgagaatagtttctgagattttagaatcaaatggttca
agctcaatggctacagtttgtggttcatctttatctatgatggatgcaggtgtacctatc
gctgagccagtagcaggtattgctatgggtcttatcaaagatggctctaaatatgcggtg
ctttctgacatcttaggtgatgaagatcatcttggagatatggactttaaagttgctggt
actagatatggtgttacagcacttcaaatggatatcaaaatcaaaggtatttctcgtgat
attcttgagcaagctttagagcaggctcgtagtggtagattacatatacttggtattatg
aatgaagtaattaaagaacataaagaaactgtttctaatgttgctcctcaaattcatgtt
atgaacatcaaaccagctaagattaaagatgttgttggtcgtggtggttctactgtaaaa
ggtattgcagaaaaaactggtgcgcaaatagatacaagcgacactggtgaagttaaaatc
tttgcaagagataaggcttctttagatatggctgttatgatggttgaagaagttgtagct
gaagctgaagaaggacaagtttataaaggtaaaatagttaagatacttgactcaggtgct
tttgtgaatttgtttggtaagcaagatggctatttaccatttgctgatgttgagcaagca
ggtatcaaaacaaactccctatctgaaggacaacctttggaggttgttgttcaagcagtt
gatagaatgggtagagtcaaggttggtatagtaaagaggtag
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